Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pdlim1O70400 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.06■■□□□ 1.28
Pdlim1O70400 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pdlim1O70400 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.04■■□□□ 1.28
Pdlim1O70400 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Pdlim1O70400 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pdlim1O70400 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Pdlim1O70400 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pdlim1O70400 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Pdlim1O70400 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pdlim1O70400 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pdlim1O70400 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pdlim1O70400 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pdlim1O70400 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.99■■□□□ 1.27
Pdlim1O70400 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pdlim1O70400 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pdlim1O70400 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.97■■□□□ 1.27
Pdlim1O70400 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.97■■□□□ 1.27
Pdlim1O70400 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pdlim1O70400 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pdlim1O70400 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Pdlim1O70400 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Pdlim1O70400 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Pdlim1O70400 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Pdlim1O70400 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Pdlim1O70400 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.96■■□□□ 1.27
Pdlim1O70400 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pdlim1O70400 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.96■■□□□ 1.27
Pdlim1O70400 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pdlim1O70400 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pdlim1O70400 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
Pdlim1O70400 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pdlim1O70400 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pdlim1O70400 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
Pdlim1O70400 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pdlim1O70400 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pdlim1O70400 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Pdlim1O70400 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
Pdlim1O70400 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Pdlim1O70400 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.93■■□□□ 1.26
Pdlim1O70400 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pdlim1O70400 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pdlim1O70400 Gm4799-201ENSMUST00000095396 657 ntBASIC22.92■■□□□ 1.26
Pdlim1O70400 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pdlim1O70400 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pdlim1O70400 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
Pdlim1O70400 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pdlim1O70400 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Pdlim1O70400 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.89■■□□□ 1.26
Pdlim1O70400 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
Pdlim1O70400 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.89■■□□□ 1.25
Pdlim1O70400 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
Pdlim1O70400 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.89■■□□□ 1.25
Pdlim1O70400 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Pdlim1O70400 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
Pdlim1O70400 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pdlim1O70400 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.88■■□□□ 1.25
Pdlim1O70400 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Pdlim1O70400 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Pdlim1O70400 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pdlim1O70400 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.87■■□□□ 1.25
Pdlim1O70400 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pdlim1O70400 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pdlim1O70400 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.86■■□□□ 1.25
Pdlim1O70400 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.86■■□□□ 1.25
Pdlim1O70400 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pdlim1O70400 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pdlim1O70400 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.84■■□□□ 1.25
Pdlim1O70400 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.84■■□□□ 1.25
Pdlim1O70400 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pdlim1O70400 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Pdlim1O70400 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.83■■□□□ 1.25
Pdlim1O70400 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
Pdlim1O70400 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pdlim1O70400 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.24
Pdlim1O70400 Mir3960-201ENSMUST00000198213 73 ntBASIC22.82■■□□□ 1.24
Pdlim1O70400 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pdlim1O70400 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pdlim1O70400 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Pdlim1O70400 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.81■■□□□ 1.24
Pdlim1O70400 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pdlim1O70400 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pdlim1O70400 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pdlim1O70400 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
Pdlim1O70400 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.8■■□□□ 1.24
Pdlim1O70400 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pdlim1O70400 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.79■■□□□ 1.24
Pdlim1O70400 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pdlim1O70400 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.79■■□□□ 1.24
Pdlim1O70400 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
Pdlim1O70400 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Pdlim1O70400 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pdlim1O70400 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pdlim1O70400 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pdlim1O70400 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.78■■□□□ 1.24
Pdlim1O70400 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pdlim1O70400 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pdlim1O70400 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.77■■□□□ 1.24
Pdlim1O70400 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Pdlim1O70400 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms