Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pde6dO55057 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pde6dO55057 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pde6dO55057 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pde6dO55057 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pde6dO55057 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Pde6dO55057 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pde6dO55057 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pde6dO55057 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pde6dO55057 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Pde6dO55057 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pde6dO55057 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.3■□□□□ 0.52
Pde6dO55057 Peli2-204ENSMUST00000226513 1320 ntBASIC18.3■□□□□ 0.52
Pde6dO55057 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pde6dO55057 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pde6dO55057 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.29■□□□□ 0.52
Pde6dO55057 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pde6dO55057 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.29■□□□□ 0.52
Pde6dO55057 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pde6dO55057 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pde6dO55057 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pde6dO55057 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pde6dO55057 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pde6dO55057 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pde6dO55057 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pde6dO55057 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Pde6dO55057 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pde6dO55057 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pde6dO55057 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pde6dO55057 Gm17082-201ENSMUST00000166043 1091 ntBASIC18.27■□□□□ 0.52
Pde6dO55057 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.27■□□□□ 0.52
Pde6dO55057 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.51
Pde6dO55057 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pde6dO55057 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pde6dO55057 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pde6dO55057 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pde6dO55057 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pde6dO55057 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pde6dO55057 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pde6dO55057 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pde6dO55057 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.26■□□□□ 0.51
Pde6dO55057 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pde6dO55057 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pde6dO55057 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pde6dO55057 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pde6dO55057 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pde6dO55057 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pde6dO55057 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.25■□□□□ 0.51
Pde6dO55057 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.25■□□□□ 0.51
Pde6dO55057 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pde6dO55057 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pde6dO55057 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pde6dO55057 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pde6dO55057 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pde6dO55057 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pde6dO55057 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pde6dO55057 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Pde6dO55057 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pde6dO55057 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pde6dO55057 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pde6dO55057 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pde6dO55057 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Pde6dO55057 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pde6dO55057 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
Pde6dO55057 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Pde6dO55057 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pde6dO55057 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pde6dO55057 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Pde6dO55057 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.2■□□□□ 0.5
Pde6dO55057 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pde6dO55057 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pde6dO55057 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pde6dO55057 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Pde6dO55057 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pde6dO55057 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Pde6dO55057 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pde6dO55057 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pde6dO55057 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Pde6dO55057 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pde6dO55057 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pde6dO55057 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Pde6dO55057 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Pde6dO55057 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Pde6dO55057 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pde6dO55057 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pde6dO55057 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pde6dO55057 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pde6dO55057 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Pde6dO55057 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.18■□□□□ 0.5
Pde6dO55057 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pde6dO55057 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pde6dO55057 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Pde6dO55057 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pde6dO55057 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.17■□□□□ 0.5
Pde6dO55057 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pde6dO55057 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pde6dO55057 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pde6dO55057 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pde6dO55057 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pde6dO55057 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms