Protein–RNA interactions for Protein: O08738

Casp6, Caspase-6, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp6O08738 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.16■□□□□ 0.82
Casp6O08738 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Casp6O08738 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Casp6O08738 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Casp6O08738 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Casp6O08738 Gm45364-201ENSMUST00000210883 159 ntBASIC20.14■□□□□ 0.81
Casp6O08738 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Casp6O08738 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Casp6O08738 Gm7332-201ENSMUST00000118351 454 ntBASIC20.12■□□□□ 0.81
Casp6O08738 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.12■□□□□ 0.81
Casp6O08738 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Casp6O08738 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Casp6O08738 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Casp6O08738 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.11■□□□□ 0.81
Casp6O08738 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Casp6O08738 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Casp6O08738 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Casp6O08738 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Casp6O08738 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Casp6O08738 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Casp6O08738 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Casp6O08738 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Casp6O08738 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Casp6O08738 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Casp6O08738 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.1■□□□□ 0.81
Casp6O08738 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Casp6O08738 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Casp6O08738 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Casp6O08738 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.09■□□□□ 0.81
Casp6O08738 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Casp6O08738 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.09■□□□□ 0.81
Casp6O08738 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Casp6O08738 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.08■□□□□ 0.81
Casp6O08738 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.08■□□□□ 0.8
Casp6O08738 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Casp6O08738 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Casp6O08738 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Casp6O08738 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Casp6O08738 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Casp6O08738 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Casp6O08738 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Casp6O08738 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Casp6O08738 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.06■□□□□ 0.8
Casp6O08738 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Casp6O08738 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.05■□□□□ 0.8
Casp6O08738 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Casp6O08738 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Casp6O08738 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Casp6O08738 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Casp6O08738 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Casp6O08738 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Casp6O08738 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Casp6O08738 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Casp6O08738 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Casp6O08738 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Casp6O08738 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Casp6O08738 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Casp6O08738 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Casp6O08738 Gm27502-201ENSMUST00000183495 199 ntBASIC20■□□□□ 0.79
Casp6O08738 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20■□□□□ 0.79
Casp6O08738 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Casp6O08738 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Casp6O08738 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Casp6O08738 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Casp6O08738 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Casp6O08738 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Casp6O08738 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Casp6O08738 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Casp6O08738 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Casp6O08738 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Casp6O08738 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Casp6O08738 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.96■□□□□ 0.79
Casp6O08738 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Casp6O08738 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Casp6O08738 Gm9812-201ENSMUST00000061934 968 ntBASIC19.96■□□□□ 0.79
Casp6O08738 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
Casp6O08738 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Casp6O08738 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Casp6O08738 Gm14523-201ENSMUST00000117260 558 ntBASIC19.95■□□□□ 0.78
Casp6O08738 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.95■□□□□ 0.78
Casp6O08738 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Casp6O08738 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.95■□□□□ 0.78
Casp6O08738 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Casp6O08738 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Casp6O08738 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Casp6O08738 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Casp6O08738 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.94■□□□□ 0.78
Casp6O08738 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Casp6O08738 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Casp6O08738 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.94■□□□□ 0.78
Casp6O08738 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.94■□□□□ 0.78
Casp6O08738 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Casp6O08738 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.93■□□□□ 0.78
Casp6O08738 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Casp6O08738 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Casp6O08738 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Casp6O08738 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Casp6O08738 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Casp6O08738 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Casp6O08738 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms