Protein–RNA interactions for Protein: J3KMS6

Gm21818, MCG122238, isoform CRA_a, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21818J3KMS6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm21818J3KMS6 Gm24970-201ENSMUST00000175582 82 ntBASIC19.73■□□□□ 0.75
Gm21818J3KMS6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.73■□□□□ 0.75
Gm21818J3KMS6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Gm21818J3KMS6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Gm21818J3KMS6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Gm21818J3KMS6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Gm21818J3KMS6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Gm21818J3KMS6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm21818J3KMS6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm21818J3KMS6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gm21818J3KMS6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gm21818J3KMS6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm21818J3KMS6 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gm21818J3KMS6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm21818J3KMS6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm21818J3KMS6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm21818J3KMS6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm21818J3KMS6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Gm21818J3KMS6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm21818J3KMS6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gm21818J3KMS6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm21818J3KMS6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.69■□□□□ 0.74
Gm21818J3KMS6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm21818J3KMS6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm21818J3KMS6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm21818J3KMS6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm21818J3KMS6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm21818J3KMS6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm21818J3KMS6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm21818J3KMS6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm21818J3KMS6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.67■□□□□ 0.74
Gm21818J3KMS6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.67■□□□□ 0.74
Gm21818J3KMS6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Gm21818J3KMS6 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm21818J3KMS6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Gm21818J3KMS6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Gm21818J3KMS6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm21818J3KMS6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm21818J3KMS6 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gm21818J3KMS6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm21818J3KMS6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Gm21818J3KMS6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Gm21818J3KMS6 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.66■□□□□ 0.74
Gm21818J3KMS6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gm21818J3KMS6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Gm21818J3KMS6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm21818J3KMS6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm21818J3KMS6 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Gm21818J3KMS6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm21818J3KMS6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Gm21818J3KMS6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.64■□□□□ 0.73
Gm21818J3KMS6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm21818J3KMS6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
Gm21818J3KMS6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm21818J3KMS6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm21818J3KMS6 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Gm21818J3KMS6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm21818J3KMS6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Gm21818J3KMS6 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.63■□□□□ 0.73
Gm21818J3KMS6 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gm21818J3KMS6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.62■□□□□ 0.73
Gm21818J3KMS6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm21818J3KMS6 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm21818J3KMS6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm21818J3KMS6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Gm21818J3KMS6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm21818J3KMS6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm21818J3KMS6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Gm21818J3KMS6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm21818J3KMS6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
Gm21818J3KMS6 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm21818J3KMS6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Gm21818J3KMS6 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.59■□□□□ 0.73
Gm21818J3KMS6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Gm21818J3KMS6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gm21818J3KMS6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.58■□□□□ 0.72
Gm21818J3KMS6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Gm21818J3KMS6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gm21818J3KMS6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gm21818J3KMS6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm21818J3KMS6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Gm21818J3KMS6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.57■□□□□ 0.72
Gm21818J3KMS6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm21818J3KMS6 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.56■□□□□ 0.72
Gm21818J3KMS6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm21818J3KMS6 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Gm21818J3KMS6 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.55■□□□□ 0.72
Gm21818J3KMS6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm21818J3KMS6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm21818J3KMS6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm21818J3KMS6 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Gm21818J3KMS6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.54■□□□□ 0.72
Gm21818J3KMS6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.53■□□□□ 0.72
Gm21818J3KMS6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Gm21818J3KMS6 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm21818J3KMS6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm21818J3KMS6 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm21818J3KMS6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm21818J3KMS6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms