Protein–RNA interactions for Protein: G5E8X0

Cldn20, Claudin, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn20G5E8X0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Cldn20G5E8X0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cldn20G5E8X0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.13■□□□□ 0.81
Cldn20G5E8X0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cldn20G5E8X0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cldn20G5E8X0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cldn20G5E8X0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Cldn20G5E8X0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cldn20G5E8X0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Cldn20G5E8X0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cldn20G5E8X0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cldn20G5E8X0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cldn20G5E8X0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cldn20G5E8X0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cldn20G5E8X0 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.1■□□□□ 0.81
Cldn20G5E8X0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cldn20G5E8X0 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.1■□□□□ 0.81
Cldn20G5E8X0 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Cldn20G5E8X0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Cldn20G5E8X0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cldn20G5E8X0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn20G5E8X0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn20G5E8X0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn20G5E8X0 Gm24970-201ENSMUST00000175582 82 ntBASIC20.09■□□□□ 0.81
Cldn20G5E8X0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cldn20G5E8X0 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cldn20G5E8X0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Cldn20G5E8X0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cldn20G5E8X0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cldn20G5E8X0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cldn20G5E8X0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cldn20G5E8X0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.07■□□□□ 0.8
Cldn20G5E8X0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cldn20G5E8X0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn20G5E8X0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Cldn20G5E8X0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Cldn20G5E8X0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Cldn20G5E8X0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn20G5E8X0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn20G5E8X0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn20G5E8X0 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn20G5E8X0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Cldn20G5E8X0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn20G5E8X0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.05■□□□□ 0.8
Cldn20G5E8X0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Cldn20G5E8X0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn20G5E8X0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.05■□□□□ 0.8
Cldn20G5E8X0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn20G5E8X0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn20G5E8X0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cldn20G5E8X0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.04■□□□□ 0.8
Cldn20G5E8X0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Cldn20G5E8X0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Cldn20G5E8X0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Cldn20G5E8X0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Cldn20G5E8X0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.03■□□□□ 0.8
Cldn20G5E8X0 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn20G5E8X0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn20G5E8X0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cldn20G5E8X0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cldn20G5E8X0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.02■□□□□ 0.8
Cldn20G5E8X0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Cldn20G5E8X0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cldn20G5E8X0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cldn20G5E8X0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn20G5E8X0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn20G5E8X0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn20G5E8X0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn20G5E8X0 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Cldn20G5E8X0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn20G5E8X0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Cldn20G5E8X0 AC157572.2-201ENSMUST00000226970 908 ntBASIC20■□□□□ 0.79
Cldn20G5E8X0 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Cldn20G5E8X0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Cldn20G5E8X0 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn20G5E8X0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn20G5E8X0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn20G5E8X0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn20G5E8X0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn20G5E8X0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn20G5E8X0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn20G5E8X0 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn20G5E8X0 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn20G5E8X0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn20G5E8X0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn20G5E8X0 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn20G5E8X0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn20G5E8X0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn20G5E8X0 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn20G5E8X0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn20G5E8X0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn20G5E8X0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
Cldn20G5E8X0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn20G5E8X0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
Cldn20G5E8X0 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn20G5E8X0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn20G5E8X0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn20G5E8X0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.95■□□□□ 0.78
Cldn20G5E8X0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn20G5E8X0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms