Protein–RNA interactions for Protein: F6RGA8

C530025M09Rik, RIKEN cDNA C530025M09 gene, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C530025M09RikF6RGA8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C530025M09RikF6RGA8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
C530025M09RikF6RGA8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC15.31■□□□□ 0.04
C530025M09RikF6RGA8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C530025M09RikF6RGA8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC15.31■□□□□ 0.04
C530025M09RikF6RGA8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
C530025M09RikF6RGA8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
C530025M09RikF6RGA8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C530025M09RikF6RGA8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C530025M09RikF6RGA8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C530025M09RikF6RGA8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
C530025M09RikF6RGA8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
C530025M09RikF6RGA8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
C530025M09RikF6RGA8 Particl-201ENSMUST00000205370 1560 ntBASIC15.28■□□□□ 0.04
C530025M09RikF6RGA8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
C530025M09RikF6RGA8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C530025M09RikF6RGA8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C530025M09RikF6RGA8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C530025M09RikF6RGA8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C530025M09RikF6RGA8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
C530025M09RikF6RGA8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C530025M09RikF6RGA8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
C530025M09RikF6RGA8 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C530025M09RikF6RGA8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC15.26■□□□□ 0.03
C530025M09RikF6RGA8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
C530025M09RikF6RGA8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C530025M09RikF6RGA8 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
C530025M09RikF6RGA8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C530025M09RikF6RGA8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
C530025M09RikF6RGA8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
C530025M09RikF6RGA8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
C530025M09RikF6RGA8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C530025M09RikF6RGA8 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C530025M09RikF6RGA8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
C530025M09RikF6RGA8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
C530025M09RikF6RGA8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C530025M09RikF6RGA8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
C530025M09RikF6RGA8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
C530025M09RikF6RGA8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
C530025M09RikF6RGA8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
C530025M09RikF6RGA8 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC15.22■□□□□ 0.03
C530025M09RikF6RGA8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
C530025M09RikF6RGA8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C530025M09RikF6RGA8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
C530025M09RikF6RGA8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
C530025M09RikF6RGA8 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
C530025M09RikF6RGA8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC15.2■□□□□ 0.02
C530025M09RikF6RGA8 Tdp2-203ENSMUST00000223804 1136 ntBASIC15.2■□□□□ 0.02
C530025M09RikF6RGA8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C530025M09RikF6RGA8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
C530025M09RikF6RGA8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C530025M09RikF6RGA8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC15.19■□□□□ 0.02
C530025M09RikF6RGA8 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C530025M09RikF6RGA8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
C530025M09RikF6RGA8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
C530025M09RikF6RGA8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C530025M09RikF6RGA8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C530025M09RikF6RGA8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC15.18■□□□□ 0.02
C530025M09RikF6RGA8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C530025M09RikF6RGA8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
C530025M09RikF6RGA8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
C530025M09RikF6RGA8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C530025M09RikF6RGA8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C530025M09RikF6RGA8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C530025M09RikF6RGA8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC15.17■□□□□ 0.02
C530025M09RikF6RGA8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
C530025M09RikF6RGA8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C530025M09RikF6RGA8 Gm45855-201ENSMUST00000212546 880 ntBASIC15.17■□□□□ 0.02
C530025M09RikF6RGA8 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C530025M09RikF6RGA8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
C530025M09RikF6RGA8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
C530025M09RikF6RGA8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C530025M09RikF6RGA8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C530025M09RikF6RGA8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C530025M09RikF6RGA8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
C530025M09RikF6RGA8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C530025M09RikF6RGA8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C530025M09RikF6RGA8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C530025M09RikF6RGA8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
C530025M09RikF6RGA8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC15.15■□□□□ 0.02
C530025M09RikF6RGA8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
C530025M09RikF6RGA8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
C530025M09RikF6RGA8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
C530025M09RikF6RGA8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
C530025M09RikF6RGA8 Gm42699-201ENSMUST00000198104 1657 ntBASIC15.13■□□□□ 0.01
C530025M09RikF6RGA8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
C530025M09RikF6RGA8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
C530025M09RikF6RGA8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
C530025M09RikF6RGA8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
C530025M09RikF6RGA8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
C530025M09RikF6RGA8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
C530025M09RikF6RGA8 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
C530025M09RikF6RGA8 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
C530025M09RikF6RGA8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
C530025M09RikF6RGA8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C530025M09RikF6RGA8 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
C530025M09RikF6RGA8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
C530025M09RikF6RGA8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C530025M09RikF6RGA8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
C530025M09RikF6RGA8 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms