Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Gm5878E9PUB3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm5878E9PUB3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm5878E9PUB3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm5878E9PUB3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Gm5878E9PUB3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm5878E9PUB3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Gm5878E9PUB3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm5878E9PUB3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm5878E9PUB3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gm5878E9PUB3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm5878E9PUB3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm5878E9PUB3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Gm5878E9PUB3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Gm5878E9PUB3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gm5878E9PUB3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm5878E9PUB3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm5878E9PUB3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm5878E9PUB3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm5878E9PUB3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm5878E9PUB3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm5878E9PUB3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm5878E9PUB3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm5878E9PUB3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm5878E9PUB3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm5878E9PUB3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Gm5878E9PUB3 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.45■□□□□ 0.38
Gm5878E9PUB3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Gm5878E9PUB3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Gm5878E9PUB3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Gm5878E9PUB3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm5878E9PUB3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm5878E9PUB3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Gm5878E9PUB3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm5878E9PUB3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm5878E9PUB3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm5878E9PUB3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm5878E9PUB3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Gm5878E9PUB3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm5878E9PUB3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm5878E9PUB3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm5878E9PUB3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Gm5878E9PUB3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Gm5878E9PUB3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm5878E9PUB3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC17.42■□□□□ 0.38
Gm5878E9PUB3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
Gm5878E9PUB3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm5878E9PUB3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gm5878E9PUB3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm5878E9PUB3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.41■□□□□ 0.38
Gm5878E9PUB3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm5878E9PUB3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm5878E9PUB3 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.4■□□□□ 0.38
Gm5878E9PUB3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Gm5878E9PUB3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5878E9PUB3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5878E9PUB3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5878E9PUB3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5878E9PUB3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Gm5878E9PUB3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm5878E9PUB3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Gm5878E9PUB3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Gm5878E9PUB3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm5878E9PUB3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Gm5878E9PUB3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm5878E9PUB3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm5878E9PUB3 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.36■□□□□ 0.37
Gm5878E9PUB3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Gm5878E9PUB3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm5878E9PUB3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm5878E9PUB3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Gm5878E9PUB3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5878E9PUB3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5878E9PUB3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5878E9PUB3 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.35■□□□□ 0.37
Gm5878E9PUB3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Gm5878E9PUB3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Gm5878E9PUB3 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm5878E9PUB3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm5878E9PUB3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm5878E9PUB3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm5878E9PUB3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Gm5878E9PUB3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm5878E9PUB3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Gm5878E9PUB3 Nkain2-201ENSMUST00000092602 558 ntBASIC17.33■□□□□ 0.36
Gm5878E9PUB3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Gm5878E9PUB3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm5878E9PUB3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5878E9PUB3 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC17.32■□□□□ 0.36
Gm5878E9PUB3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC17.32■□□□□ 0.36
Gm5878E9PUB3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5878E9PUB3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5878E9PUB3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5878E9PUB3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5878E9PUB3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm5878E9PUB3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm5878E9PUB3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Gm5878E9PUB3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm5878E9PUB3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm5878E9PUB3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms