Protein–RNA interactions for Protein: A7VMS3

H2-M5, Histocompatibility 2, M region locus 5, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2-M5A7VMS3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
H2-M5A7VMS3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
H2-M5A7VMS3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
H2-M5A7VMS3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
H2-M5A7VMS3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
H2-M5A7VMS3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
H2-M5A7VMS3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.58■□□□□ 0.72
H2-M5A7VMS3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
H2-M5A7VMS3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
H2-M5A7VMS3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
H2-M5A7VMS3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
H2-M5A7VMS3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
H2-M5A7VMS3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
H2-M5A7VMS3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
H2-M5A7VMS3 Gm37136-201ENSMUST00000194368 194 ntBASIC19.57■□□□□ 0.72
H2-M5A7VMS3 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.57■□□□□ 0.72
H2-M5A7VMS3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.57■□□□□ 0.72
H2-M5A7VMS3 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
H2-M5A7VMS3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
H2-M5A7VMS3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
H2-M5A7VMS3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
H2-M5A7VMS3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
H2-M5A7VMS3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
H2-M5A7VMS3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.56■□□□□ 0.72
H2-M5A7VMS3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
H2-M5A7VMS3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
H2-M5A7VMS3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
H2-M5A7VMS3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
H2-M5A7VMS3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
H2-M5A7VMS3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
H2-M5A7VMS3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
H2-M5A7VMS3 Mir6538-201ENSMUST00000183713 110 ntBASIC19.55■□□□□ 0.72
H2-M5A7VMS3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
H2-M5A7VMS3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
H2-M5A7VMS3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
H2-M5A7VMS3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.54■□□□□ 0.72
H2-M5A7VMS3 Gm4799-201ENSMUST00000095396 657 ntBASIC19.54■□□□□ 0.72
H2-M5A7VMS3 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
H2-M5A7VMS3 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.53■□□□□ 0.72
H2-M5A7VMS3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H2-M5A7VMS3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H2-M5A7VMS3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
H2-M5A7VMS3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
H2-M5A7VMS3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
H2-M5A7VMS3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
H2-M5A7VMS3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
H2-M5A7VMS3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H2-M5A7VMS3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H2-M5A7VMS3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H2-M5A7VMS3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H2-M5A7VMS3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H2-M5A7VMS3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
H2-M5A7VMS3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.5■□□□□ 0.71
H2-M5A7VMS3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
H2-M5A7VMS3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H2-M5A7VMS3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H2-M5A7VMS3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H2-M5A7VMS3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.48■□□□□ 0.71
H2-M5A7VMS3 Mir3960-201ENSMUST00000198213 73 ntBASIC19.48■□□□□ 0.71
H2-M5A7VMS3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
H2-M5A7VMS3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
H2-M5A7VMS3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
H2-M5A7VMS3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
H2-M5A7VMS3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
H2-M5A7VMS3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
H2-M5A7VMS3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.46■□□□□ 0.71
H2-M5A7VMS3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
H2-M5A7VMS3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
H2-M5A7VMS3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
H2-M5A7VMS3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.45■□□□□ 0.7
H2-M5A7VMS3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
H2-M5A7VMS3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
H2-M5A7VMS3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
H2-M5A7VMS3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
H2-M5A7VMS3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
H2-M5A7VMS3 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.44■□□□□ 0.7
H2-M5A7VMS3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
H2-M5A7VMS3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.43■□□□□ 0.7
H2-M5A7VMS3 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
H2-M5A7VMS3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.43■□□□□ 0.7
H2-M5A7VMS3 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.43■□□□□ 0.7
H2-M5A7VMS3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.43■□□□□ 0.7
H2-M5A7VMS3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
H2-M5A7VMS3 Gm11175-201ENSMUST00000116172 543 ntBASIC19.42■□□□□ 0.7
H2-M5A7VMS3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
H2-M5A7VMS3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
H2-M5A7VMS3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
H2-M5A7VMS3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
H2-M5A7VMS3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
H2-M5A7VMS3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
H2-M5A7VMS3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
H2-M5A7VMS3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
H2-M5A7VMS3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
H2-M5A7VMS3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
H2-M5A7VMS3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
H2-M5A7VMS3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
H2-M5A7VMS3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
H2-M5A7VMS3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
H2-M5A7VMS3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
H2-M5A7VMS3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms