Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.44■□□□□ 0.86
Gm11127A7VMS2 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Gm11127A7VMS2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm11127A7VMS2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Gm11127A7VMS2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm11127A7VMS2 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Gm11127A7VMS2 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.42■□□□□ 0.86
Gm11127A7VMS2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Gm11127A7VMS2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm11127A7VMS2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Gm11127A7VMS2 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm11127A7VMS2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm11127A7VMS2 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.41■□□□□ 0.86
Gm11127A7VMS2 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm11127A7VMS2 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.41■□□□□ 0.86
Gm11127A7VMS2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm11127A7VMS2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm11127A7VMS2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm11127A7VMS2 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.39■□□□□ 0.85
Gm11127A7VMS2 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Gm11127A7VMS2 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Gm11127A7VMS2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm11127A7VMS2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Gm11127A7VMS2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm11127A7VMS2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm11127A7VMS2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Gm11127A7VMS2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.38■□□□□ 0.85
Gm11127A7VMS2 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm11127A7VMS2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm11127A7VMS2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.37■□□□□ 0.85
Gm11127A7VMS2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.37■□□□□ 0.85
Gm11127A7VMS2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm11127A7VMS2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Gm11127A7VMS2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm11127A7VMS2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Gm11127A7VMS2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm11127A7VMS2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Gm11127A7VMS2 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Gm11127A7VMS2 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.35■□□□□ 0.85
Gm11127A7VMS2 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.35■□□□□ 0.85
Gm11127A7VMS2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Gm11127A7VMS2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm11127A7VMS2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.34■□□□□ 0.85
Gm11127A7VMS2 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.34■□□□□ 0.85
Gm11127A7VMS2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm11127A7VMS2 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm11127A7VMS2 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.34■□□□□ 0.85
Gm11127A7VMS2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm11127A7VMS2 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm11127A7VMS2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.34■□□□□ 0.85
Gm11127A7VMS2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Gm11127A7VMS2 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Gm11127A7VMS2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm11127A7VMS2 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm11127A7VMS2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
Gm11127A7VMS2 Gm9397-201ENSMUST00000200125 605 ntBASIC20.33■□□□□ 0.85
Gm11127A7VMS2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm11127A7VMS2 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.33■□□□□ 0.85
Gm11127A7VMS2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Gm11127A7VMS2 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm11127A7VMS2 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.32■□□□□ 0.84
Gm11127A7VMS2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Gm11127A7VMS2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Gm11127A7VMS2 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gm11127A7VMS2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm11127A7VMS2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Gm11127A7VMS2 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm11127A7VMS2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm11127A7VMS2 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.3■□□□□ 0.84
Gm11127A7VMS2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Gm11127A7VMS2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.29■□□□□ 0.84
Gm11127A7VMS2 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm11127A7VMS2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm11127A7VMS2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.28■□□□□ 0.84
Gm11127A7VMS2 Gm45855-201ENSMUST00000212546 880 ntBASIC20.28■□□□□ 0.84
Gm11127A7VMS2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm11127A7VMS2 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Gm11127A7VMS2 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm11127A7VMS2 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Gm11127A7VMS2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm11127A7VMS2 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm11127A7VMS2 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Gm11127A7VMS2 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm11127A7VMS2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm11127A7VMS2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Gm11127A7VMS2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Gm11127A7VMS2 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Gm11127A7VMS2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm11127A7VMS2 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm11127A7VMS2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm11127A7VMS2 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Gm11127A7VMS2 Gm24970-201ENSMUST00000175582 82 ntBASIC20.24■□□□□ 0.83
Gm11127A7VMS2 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm11127A7VMS2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm11127A7VMS2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Gm11127A7VMS2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.22■□□□□ 0.83
Gm11127A7VMS2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Gm11127A7VMS2 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm11127A7VMS2 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.22■□□□□ 0.83
Gm11127A7VMS2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms