Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Cfap99A0A140LIX9 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Cfap99A0A140LIX9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC27.73■■■□□ 2.03
Cfap99A0A140LIX9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC27.73■■■□□ 2.03
Cfap99A0A140LIX9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC27.73■■■□□ 2.03
Cfap99A0A140LIX9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Cfap99A0A140LIX9 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Cfap99A0A140LIX9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC27.73■■■□□ 2.03
Cfap99A0A140LIX9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Cfap99A0A140LIX9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Cfap99A0A140LIX9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC27.72■■■□□ 2.03
Cfap99A0A140LIX9 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Cfap99A0A140LIX9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC27.71■■■□□ 2.03
Cfap99A0A140LIX9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Cfap99A0A140LIX9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Cfap99A0A140LIX9 Scarna2-201ENSMUST00000157560 414 ntBASIC27.7■■■□□ 2.02
Cfap99A0A140LIX9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Cfap99A0A140LIX9 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC27.69■■■□□ 2.02
Cfap99A0A140LIX9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Cfap99A0A140LIX9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Cfap99A0A140LIX9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Cfap99A0A140LIX9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC27.67■■■□□ 2.02
Cfap99A0A140LIX9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Cfap99A0A140LIX9 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC27.67■■■□□ 2.02
Cfap99A0A140LIX9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Cfap99A0A140LIX9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Cfap99A0A140LIX9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Cfap99A0A140LIX9 Gm11687-201ENSMUST00000118911 886 ntBASIC27.66■■■□□ 2.02
Cfap99A0A140LIX9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC27.66■■■□□ 2.02
Cfap99A0A140LIX9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Cfap99A0A140LIX9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC27.65■■■□□ 2.02
Cfap99A0A140LIX9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Cfap99A0A140LIX9 Gm9806-201ENSMUST00000051080 552 ntBASIC27.64■■■□□ 2.02
Cfap99A0A140LIX9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Cfap99A0A140LIX9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Cfap99A0A140LIX9 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Cfap99A0A140LIX9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Cfap99A0A140LIX9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Cfap99A0A140LIX9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Cfap99A0A140LIX9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC27.62■■■□□ 2.01
Cfap99A0A140LIX9 Gm4799-201ENSMUST00000095396 657 ntBASIC27.61■■■□□ 2.01
Cfap99A0A140LIX9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
Cfap99A0A140LIX9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
Cfap99A0A140LIX9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Cfap99A0A140LIX9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC27.6■■■□□ 2.01
Cfap99A0A140LIX9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
Cfap99A0A140LIX9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Cfap99A0A140LIX9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC27.58■■■□□ 2.01
Cfap99A0A140LIX9 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Cfap99A0A140LIX9 Pkd1-207ENSMUST00000228550 1050 ntBASIC27.57■■■□□ 2
Cfap99A0A140LIX9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
Cfap99A0A140LIX9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC27.57■■■□□ 2
Cfap99A0A140LIX9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC27.56■■■□□ 2
Cfap99A0A140LIX9 AC154454.1-201ENSMUST00000225253 216 ntBASIC27.56■■■□□ 2
Cfap99A0A140LIX9 Gm16437-201ENSMUST00000025669 507 ntBASIC27.56■■■□□ 2
Cfap99A0A140LIX9 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Cfap99A0A140LIX9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC27.55■■■□□ 2
Cfap99A0A140LIX9 Gm12366-201ENSMUST00000121722 873 ntBASIC27.55■■■□□ 2
Cfap99A0A140LIX9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC27.55■■■□□ 2
Cfap99A0A140LIX9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC27.55■■■□□ 2
Cfap99A0A140LIX9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC27.55■■■□□ 2
Cfap99A0A140LIX9 Gm5786-201ENSMUST00000085368 882 ntBASIC27.55■■■□□ 2
Cfap99A0A140LIX9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Cfap99A0A140LIX9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC27.55■■■□□ 2
Cfap99A0A140LIX9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Cfap99A0A140LIX9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
Cfap99A0A140LIX9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC27.55■■■□□ 2
Cfap99A0A140LIX9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Cfap99A0A140LIX9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Cfap99A0A140LIX9 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC27.54■■■□□ 2
Cfap99A0A140LIX9 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Cfap99A0A140LIX9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
Cfap99A0A140LIX9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC27.53■■■□□ 2
Cfap99A0A140LIX9 Mir3960-201ENSMUST00000198213 73 ntBASIC27.53■■■□□ 2
Cfap99A0A140LIX9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Cfap99A0A140LIX9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC27.53■■■□□ 2
Cfap99A0A140LIX9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC27.53■■■□□ 2
Cfap99A0A140LIX9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC27.52■■■□□ 2
Cfap99A0A140LIX9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC27.52■■■□□ 2
Cfap99A0A140LIX9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC27.51■■■□□ 2
Cfap99A0A140LIX9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC27.51■■□□□ 1.99
Cfap99A0A140LIX9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Cfap99A0A140LIX9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC27.51■■□□□ 1.99
Cfap99A0A140LIX9 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC27.5■■□□□ 1.99
Cfap99A0A140LIX9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Cfap99A0A140LIX9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Cfap99A0A140LIX9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Cfap99A0A140LIX9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Cfap99A0A140LIX9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Cfap99A0A140LIX9 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
Cfap99A0A140LIX9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC27.47■■□□□ 1.99
Cfap99A0A140LIX9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Cfap99A0A140LIX9 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Cfap99A0A140LIX9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Cfap99A0A140LIX9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Cfap99A0A140LIX9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC27.45■■□□□ 1.98
Cfap99A0A140LIX9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC27.45■■□□□ 1.98
Cfap99A0A140LIX9 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC27.45■■□□□ 1.98
Cfap99A0A140LIX9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC27.44■■□□□ 1.98
Cfap99A0A140LIX9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC27.44■■□□□ 1.98
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms