Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.18■□□□□ 0.5
Trav7-5A0A0G2JFX6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav7-5A0A0G2JFX6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav7-5A0A0G2JFX6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Trav7-5A0A0G2JFX6 Gm11599-201ENSMUST00000118720 878 ntBASIC18.16■□□□□ 0.5
Trav7-5A0A0G2JFX6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Trav7-5A0A0G2JFX6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav7-5A0A0G2JFX6 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav7-5A0A0G2JFX6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav7-5A0A0G2JFX6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Trav7-5A0A0G2JFX6 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav7-5A0A0G2JFX6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav7-5A0A0G2JFX6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trav7-5A0A0G2JFX6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav7-5A0A0G2JFX6 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Trav7-5A0A0G2JFX6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
Trav7-5A0A0G2JFX6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav7-5A0A0G2JFX6 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav7-5A0A0G2JFX6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trav7-5A0A0G2JFX6 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav7-5A0A0G2JFX6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.13■□□□□ 0.49
Trav7-5A0A0G2JFX6 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav7-5A0A0G2JFX6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trav7-5A0A0G2JFX6 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav7-5A0A0G2JFX6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav7-5A0A0G2JFX6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav7-5A0A0G2JFX6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav7-5A0A0G2JFX6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav7-5A0A0G2JFX6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Trav7-5A0A0G2JFX6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trav7-5A0A0G2JFX6 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.09■□□□□ 0.49
Trav7-5A0A0G2JFX6 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.09■□□□□ 0.49
Trav7-5A0A0G2JFX6 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Trav7-5A0A0G2JFX6 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav7-5A0A0G2JFX6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav7-5A0A0G2JFX6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trav7-5A0A0G2JFX6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.09■□□□□ 0.49
Trav7-5A0A0G2JFX6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav7-5A0A0G2JFX6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav7-5A0A0G2JFX6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Trav7-5A0A0G2JFX6 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Trav7-5A0A0G2JFX6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trav7-5A0A0G2JFX6 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.08■□□□□ 0.48
Trav7-5A0A0G2JFX6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trav7-5A0A0G2JFX6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav7-5A0A0G2JFX6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav7-5A0A0G2JFX6 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav7-5A0A0G2JFX6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav7-5A0A0G2JFX6 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trav7-5A0A0G2JFX6 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trav7-5A0A0G2JFX6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav7-5A0A0G2JFX6 Gm37136-201ENSMUST00000194368 194 ntBASIC18.07■□□□□ 0.48
Trav7-5A0A0G2JFX6 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav7-5A0A0G2JFX6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav7-5A0A0G2JFX6 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav7-5A0A0G2JFX6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav7-5A0A0G2JFX6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.06■□□□□ 0.48
Trav7-5A0A0G2JFX6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav7-5A0A0G2JFX6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Trav7-5A0A0G2JFX6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
Trav7-5A0A0G2JFX6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav7-5A0A0G2JFX6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.05■□□□□ 0.48
Trav7-5A0A0G2JFX6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav7-5A0A0G2JFX6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.04■□□□□ 0.48
Trav7-5A0A0G2JFX6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav7-5A0A0G2JFX6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav7-5A0A0G2JFX6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Trav7-5A0A0G2JFX6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav7-5A0A0G2JFX6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav7-5A0A0G2JFX6 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav7-5A0A0G2JFX6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav7-5A0A0G2JFX6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav7-5A0A0G2JFX6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav7-5A0A0G2JFX6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Trav7-5A0A0G2JFX6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.01■□□□□ 0.47
Trav7-5A0A0G2JFX6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav7-5A0A0G2JFX6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav7-5A0A0G2JFX6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Trav7-5A0A0G2JFX6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav7-5A0A0G2JFX6 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav7-5A0A0G2JFX6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav7-5A0A0G2JFX6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18■□□□□ 0.47
Trav7-5A0A0G2JFX6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav7-5A0A0G2JFX6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Trav7-5A0A0G2JFX6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Trav7-5A0A0G2JFX6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.99■□□□□ 0.47
Trav7-5A0A0G2JFX6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav7-5A0A0G2JFX6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav7-5A0A0G2JFX6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav7-5A0A0G2JFX6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav7-5A0A0G2JFX6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav7-5A0A0G2JFX6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav7-5A0A0G2JFX6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trav7-5A0A0G2JFX6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Trav7-5A0A0G2JFX6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav7-5A0A0G2JFX6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav7-5A0A0G2JFX6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav7-5A0A0G2JFX6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trav7-5A0A0G2JFX6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav7-5A0A0G2JFX6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms