Protein–RNA interactions for Protein: A0A0B4J1J5

Ighv9-3, Immunoglobulin heavy variable V9-3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv9-3A0A0B4J1J5 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ighv9-3A0A0B4J1J5 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ighv9-3A0A0B4J1J5 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ighv9-3A0A0B4J1J5 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ighv9-3A0A0B4J1J5 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ighv9-3A0A0B4J1J5 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ighv9-3A0A0B4J1J5 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ighv9-3A0A0B4J1J5 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ighv9-3A0A0B4J1J5 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ighv9-3A0A0B4J1J5 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ighv9-3A0A0B4J1J5 Gm37136-201ENSMUST00000194368 194 ntBASIC19.29■□□□□ 0.68
Ighv9-3A0A0B4J1J5 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv9-3A0A0B4J1J5 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv9-3A0A0B4J1J5 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Ighv9-3A0A0B4J1J5 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ighv9-3A0A0B4J1J5 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ighv9-3A0A0B4J1J5 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ighv9-3A0A0B4J1J5 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.27■□□□□ 0.68
Ighv9-3A0A0B4J1J5 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.27■□□□□ 0.68
Ighv9-3A0A0B4J1J5 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ighv9-3A0A0B4J1J5 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ighv9-3A0A0B4J1J5 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.27■□□□□ 0.67
Ighv9-3A0A0B4J1J5 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.27■□□□□ 0.67
Ighv9-3A0A0B4J1J5 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ighv9-3A0A0B4J1J5 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ighv9-3A0A0B4J1J5 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ighv9-3A0A0B4J1J5 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ighv9-3A0A0B4J1J5 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ighv9-3A0A0B4J1J5 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ighv9-3A0A0B4J1J5 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ighv9-3A0A0B4J1J5 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ighv9-3A0A0B4J1J5 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Ighv9-3A0A0B4J1J5 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ighv9-3A0A0B4J1J5 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ighv9-3A0A0B4J1J5 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv9-3A0A0B4J1J5 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ighv9-3A0A0B4J1J5 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv9-3A0A0B4J1J5 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv9-3A0A0B4J1J5 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv9-3A0A0B4J1J5 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv9-3A0A0B4J1J5 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ighv9-3A0A0B4J1J5 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv9-3A0A0B4J1J5 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ighv9-3A0A0B4J1J5 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.24■□□□□ 0.67
Ighv9-3A0A0B4J1J5 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ighv9-3A0A0B4J1J5 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.23■□□□□ 0.67
Ighv9-3A0A0B4J1J5 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Ighv9-3A0A0B4J1J5 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ighv9-3A0A0B4J1J5 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ighv9-3A0A0B4J1J5 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ighv9-3A0A0B4J1J5 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ighv9-3A0A0B4J1J5 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ighv9-3A0A0B4J1J5 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.21■□□□□ 0.67
Ighv9-3A0A0B4J1J5 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ighv9-3A0A0B4J1J5 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.2■□□□□ 0.66
Ighv9-3A0A0B4J1J5 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.2■□□□□ 0.66
Ighv9-3A0A0B4J1J5 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ighv9-3A0A0B4J1J5 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ighv9-3A0A0B4J1J5 Gm4799-201ENSMUST00000095396 657 ntBASIC19.19■□□□□ 0.66
Ighv9-3A0A0B4J1J5 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ighv9-3A0A0B4J1J5 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
Ighv9-3A0A0B4J1J5 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ighv9-3A0A0B4J1J5 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ighv9-3A0A0B4J1J5 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.17■□□□□ 0.66
Ighv9-3A0A0B4J1J5 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ighv9-3A0A0B4J1J5 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.17■□□□□ 0.66
Ighv9-3A0A0B4J1J5 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ighv9-3A0A0B4J1J5 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ighv9-3A0A0B4J1J5 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ighv9-3A0A0B4J1J5 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ighv9-3A0A0B4J1J5 Gm6311-201ENSMUST00000073790 878 ntBASIC19.15■□□□□ 0.66
Ighv9-3A0A0B4J1J5 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ighv9-3A0A0B4J1J5 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Ighv9-3A0A0B4J1J5 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ighv9-3A0A0B4J1J5 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Ighv9-3A0A0B4J1J5 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ighv9-3A0A0B4J1J5 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ighv9-3A0A0B4J1J5 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.13■□□□□ 0.65
Ighv9-3A0A0B4J1J5 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ighv9-3A0A0B4J1J5 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ighv9-3A0A0B4J1J5 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ighv9-3A0A0B4J1J5 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv9-3A0A0B4J1J5 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.11■□□□□ 0.65
Ighv9-3A0A0B4J1J5 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv9-3A0A0B4J1J5 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv9-3A0A0B4J1J5 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv9-3A0A0B4J1J5 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.1■□□□□ 0.65
Ighv9-3A0A0B4J1J5 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.1■□□□□ 0.65
Ighv9-3A0A0B4J1J5 Mir3960-201ENSMUST00000198213 73 ntBASIC19.1■□□□□ 0.65
Ighv9-3A0A0B4J1J5 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ighv9-3A0A0B4J1J5 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ighv9-3A0A0B4J1J5 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ighv9-3A0A0B4J1J5 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ighv9-3A0A0B4J1J5 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ighv9-3A0A0B4J1J5 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.09■□□□□ 0.65
Ighv9-3A0A0B4J1J5 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ighv9-3A0A0B4J1J5 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.08■□□□□ 0.64
Ighv9-3A0A0B4J1J5 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Ighv9-3A0A0B4J1J5 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Ighv9-3A0A0B4J1J5 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms