Protein–RNA interactions for Protein: A0A0A6YXN4

Ighv1-18, Immunoglobulin heavy variable V1-18 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-18A0A0A6YXN4 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ighv1-18A0A0A6YXN4 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ighv1-18A0A0A6YXN4 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ighv1-18A0A0A6YXN4 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ighv1-18A0A0A6YXN4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Ighv1-18A0A0A6YXN4 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Ighv1-18A0A0A6YXN4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ighv1-18A0A0A6YXN4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ighv1-18A0A0A6YXN4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ighv1-18A0A0A6YXN4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Ighv1-18A0A0A6YXN4 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ighv1-18A0A0A6YXN4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ighv1-18A0A0A6YXN4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.83■□□□□ 0.6
Ighv1-18A0A0A6YXN4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Ighv1-18A0A0A6YXN4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ighv1-18A0A0A6YXN4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Ighv1-18A0A0A6YXN4 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.82■□□□□ 0.6
Ighv1-18A0A0A6YXN4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ighv1-18A0A0A6YXN4 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ighv1-18A0A0A6YXN4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ighv1-18A0A0A6YXN4 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ighv1-18A0A0A6YXN4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ighv1-18A0A0A6YXN4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ighv1-18A0A0A6YXN4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ighv1-18A0A0A6YXN4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ighv1-18A0A0A6YXN4 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ighv1-18A0A0A6YXN4 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ighv1-18A0A0A6YXN4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ighv1-18A0A0A6YXN4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ighv1-18A0A0A6YXN4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ighv1-18A0A0A6YXN4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ighv1-18A0A0A6YXN4 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ighv1-18A0A0A6YXN4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ighv1-18A0A0A6YXN4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ighv1-18A0A0A6YXN4 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv1-18A0A0A6YXN4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv1-18A0A0A6YXN4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv1-18A0A0A6YXN4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv1-18A0A0A6YXN4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ighv1-18A0A0A6YXN4 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.76■□□□□ 0.59
Ighv1-18A0A0A6YXN4 Gm6821-201ENSMUST00000107540 542 ntBASIC18.75■□□□□ 0.59
Ighv1-18A0A0A6YXN4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv1-18A0A0A6YXN4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Ighv1-18A0A0A6YXN4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv1-18A0A0A6YXN4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.74■□□□□ 0.59
Ighv1-18A0A0A6YXN4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv1-18A0A0A6YXN4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Ighv1-18A0A0A6YXN4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Ighv1-18A0A0A6YXN4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
Ighv1-18A0A0A6YXN4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv1-18A0A0A6YXN4 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-18A0A0A6YXN4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-18A0A0A6YXN4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-18A0A0A6YXN4 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.72■□□□□ 0.59
Ighv1-18A0A0A6YXN4 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.72■□□□□ 0.59
Ighv1-18A0A0A6YXN4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-18A0A0A6YXN4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ighv1-18A0A0A6YXN4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-18A0A0A6YXN4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-18A0A0A6YXN4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ighv1-18A0A0A6YXN4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.71■□□□□ 0.59
Ighv1-18A0A0A6YXN4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-18A0A0A6YXN4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Ighv1-18A0A0A6YXN4 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Ighv1-18A0A0A6YXN4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ighv1-18A0A0A6YXN4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-18A0A0A6YXN4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.7■□□□□ 0.58
Ighv1-18A0A0A6YXN4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv1-18A0A0A6YXN4 Particl-201ENSMUST00000205370 1560 ntBASIC18.69■□□□□ 0.58
Ighv1-18A0A0A6YXN4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv1-18A0A0A6YXN4 Gm8503-201ENSMUST00000118131 455 ntBASIC18.69■□□□□ 0.58
Ighv1-18A0A0A6YXN4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv1-18A0A0A6YXN4 Nkain2-201ENSMUST00000092602 558 ntBASIC18.69■□□□□ 0.58
Ighv1-18A0A0A6YXN4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv1-18A0A0A6YXN4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Ighv1-18A0A0A6YXN4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv1-18A0A0A6YXN4 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-18A0A0A6YXN4 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-18A0A0A6YXN4 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Ighv1-18A0A0A6YXN4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-18A0A0A6YXN4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-18A0A0A6YXN4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-18A0A0A6YXN4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-18A0A0A6YXN4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-18A0A0A6YXN4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-18A0A0A6YXN4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ighv1-18A0A0A6YXN4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-18A0A0A6YXN4 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.65■□□□□ 0.58
Ighv1-18A0A0A6YXN4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-18A0A0A6YXN4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-18A0A0A6YXN4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-18A0A0A6YXN4 Gm30023-201ENSMUST00000197970 889 ntBASIC18.64■□□□□ 0.57
Ighv1-18A0A0A6YXN4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-18A0A0A6YXN4 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-18A0A0A6YXN4 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ighv1-18A0A0A6YXN4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-18A0A0A6YXN4 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-18A0A0A6YXN4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Ighv1-18A0A0A6YXN4 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-18A0A0A6YXN4 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms