Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav21-dv12A0A075B6C4 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav21-dv12A0A075B6C4 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav21-dv12A0A075B6C4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav21-dv12A0A075B6C4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav21-dv12A0A075B6C4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav21-dv12A0A075B6C4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav21-dv12A0A075B6C4 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav21-dv12A0A075B6C4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav21-dv12A0A075B6C4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav21-dv12A0A075B6C4 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav21-dv12A0A075B6C4 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav21-dv12A0A075B6C4 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav21-dv12A0A075B6C4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav21-dv12A0A075B6C4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav21-dv12A0A075B6C4 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav21-dv12A0A075B6C4 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.75■□□□□ 0.43
Trav21-dv12A0A075B6C4 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.75■□□□□ 0.43
Trav21-dv12A0A075B6C4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav21-dv12A0A075B6C4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav21-dv12A0A075B6C4 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.73■□□□□ 0.43
Trav21-dv12A0A075B6C4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.73■□□□□ 0.43
Trav21-dv12A0A075B6C4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav21-dv12A0A075B6C4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav21-dv12A0A075B6C4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trav21-dv12A0A075B6C4 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav21-dv12A0A075B6C4 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav21-dv12A0A075B6C4 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav21-dv12A0A075B6C4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trav21-dv12A0A075B6C4 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trav21-dv12A0A075B6C4 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
Trav21-dv12A0A075B6C4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav21-dv12A0A075B6C4 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav21-dv12A0A075B6C4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trav21-dv12A0A075B6C4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav21-dv12A0A075B6C4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav21-dv12A0A075B6C4 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav21-dv12A0A075B6C4 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav21-dv12A0A075B6C4 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.68■□□□□ 0.42
Trav21-dv12A0A075B6C4 Nkain2-201ENSMUST00000092602 558 ntBASIC17.68■□□□□ 0.42
Trav21-dv12A0A075B6C4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav21-dv12A0A075B6C4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav21-dv12A0A075B6C4 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav21-dv12A0A075B6C4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav21-dv12A0A075B6C4 Particl-201ENSMUST00000205370 1560 ntBASIC17.66■□□□□ 0.42
Trav21-dv12A0A075B6C4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav21-dv12A0A075B6C4 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Trav21-dv12A0A075B6C4 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav21-dv12A0A075B6C4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trav21-dv12A0A075B6C4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav21-dv12A0A075B6C4 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav21-dv12A0A075B6C4 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav21-dv12A0A075B6C4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav21-dv12A0A075B6C4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC17.65■□□□□ 0.42
Trav21-dv12A0A075B6C4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trav21-dv12A0A075B6C4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav21-dv12A0A075B6C4 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trav21-dv12A0A075B6C4 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav21-dv12A0A075B6C4 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav21-dv12A0A075B6C4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav21-dv12A0A075B6C4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Trav21-dv12A0A075B6C4 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trav21-dv12A0A075B6C4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav21-dv12A0A075B6C4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav21-dv12A0A075B6C4 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC17.63■□□□□ 0.41
Trav21-dv12A0A075B6C4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Trav21-dv12A0A075B6C4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC17.62■□□□□ 0.41
Trav21-dv12A0A075B6C4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav21-dv12A0A075B6C4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Trav21-dv12A0A075B6C4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav21-dv12A0A075B6C4 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav21-dv12A0A075B6C4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Trav21-dv12A0A075B6C4 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav21-dv12A0A075B6C4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC17.61■□□□□ 0.41
Trav21-dv12A0A075B6C4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.61■□□□□ 0.41
Trav21-dv12A0A075B6C4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC17.61■□□□□ 0.41
Trav21-dv12A0A075B6C4 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trav21-dv12A0A075B6C4 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav21-dv12A0A075B6C4 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav21-dv12A0A075B6C4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trav21-dv12A0A075B6C4 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.6■□□□□ 0.41
Trav21-dv12A0A075B6C4 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trav21-dv12A0A075B6C4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav21-dv12A0A075B6C4 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav21-dv12A0A075B6C4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav21-dv12A0A075B6C4 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav21-dv12A0A075B6C4 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav21-dv12A0A075B6C4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav21-dv12A0A075B6C4 Gm42809-201ENSMUST00000198429 1138 ntBASIC17.59■□□□□ 0.41
Trav21-dv12A0A075B6C4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.59■□□□□ 0.41
Trav21-dv12A0A075B6C4 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Trav21-dv12A0A075B6C4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav21-dv12A0A075B6C4 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav21-dv12A0A075B6C4 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trav21-dv12A0A075B6C4 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav21-dv12A0A075B6C4 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav21-dv12A0A075B6C4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav21-dv12A0A075B6C4 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav21-dv12A0A075B6C4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav21-dv12A0A075B6C4 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms