Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav14n-3A0A075B645 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Trav14n-3A0A075B645 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav14n-3A0A075B645 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav14n-3A0A075B645 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav14n-3A0A075B645 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trav14n-3A0A075B645 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav14n-3A0A075B645 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav14n-3A0A075B645 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav14n-3A0A075B645 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav14n-3A0A075B645 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav14n-3A0A075B645 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav14n-3A0A075B645 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.56■□□□□ 0.4
Trav14n-3A0A075B645 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav14n-3A0A075B645 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.56■□□□□ 0.4
Trav14n-3A0A075B645 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav14n-3A0A075B645 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trav14n-3A0A075B645 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav14n-3A0A075B645 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav14n-3A0A075B645 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav14n-3A0A075B645 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Trav14n-3A0A075B645 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav14n-3A0A075B645 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav14n-3A0A075B645 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Trav14n-3A0A075B645 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav14n-3A0A075B645 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav14n-3A0A075B645 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav14n-3A0A075B645 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav14n-3A0A075B645 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.53■□□□□ 0.4
Trav14n-3A0A075B645 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav14n-3A0A075B645 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav14n-3A0A075B645 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav14n-3A0A075B645 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.52■□□□□ 0.4
Trav14n-3A0A075B645 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Trav14n-3A0A075B645 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
Trav14n-3A0A075B645 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav14n-3A0A075B645 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav14n-3A0A075B645 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav14n-3A0A075B645 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav14n-3A0A075B645 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav14n-3A0A075B645 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav14n-3A0A075B645 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav14n-3A0A075B645 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Trav14n-3A0A075B645 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav14n-3A0A075B645 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav14n-3A0A075B645 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav14n-3A0A075B645 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav14n-3A0A075B645 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav14n-3A0A075B645 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav14n-3A0A075B645 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Trav14n-3A0A075B645 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.5■□□□□ 0.39
Trav14n-3A0A075B645 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav14n-3A0A075B645 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav14n-3A0A075B645 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trav14n-3A0A075B645 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav14n-3A0A075B645 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav14n-3A0A075B645 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav14n-3A0A075B645 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trav14n-3A0A075B645 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav14n-3A0A075B645 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav14n-3A0A075B645 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav14n-3A0A075B645 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.46■□□□□ 0.39
Trav14n-3A0A075B645 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trav14n-3A0A075B645 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav14n-3A0A075B645 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.46■□□□□ 0.38
Trav14n-3A0A075B645 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav14n-3A0A075B645 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav14n-3A0A075B645 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trav14n-3A0A075B645 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav14n-3A0A075B645 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav14n-3A0A075B645 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav14n-3A0A075B645 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav14n-3A0A075B645 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav14n-3A0A075B645 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC17.44■□□□□ 0.38
Trav14n-3A0A075B645 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav14n-3A0A075B645 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav14n-3A0A075B645 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav14n-3A0A075B645 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav14n-3A0A075B645 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav14n-3A0A075B645 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav14n-3A0A075B645 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav14n-3A0A075B645 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.42■□□□□ 0.38
Trav14n-3A0A075B645 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.42■□□□□ 0.38
Trav14n-3A0A075B645 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav14n-3A0A075B645 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav14n-3A0A075B645 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav14n-3A0A075B645 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav14n-3A0A075B645 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav14n-3A0A075B645 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav14n-3A0A075B645 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav14n-3A0A075B645 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trav14n-3A0A075B645 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trav14n-3A0A075B645 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trav14n-3A0A075B645 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trav14n-3A0A075B645 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trav14n-3A0A075B645 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trav14n-3A0A075B645 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Trav14n-3A0A075B645 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trav14n-3A0A075B645 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trav14n-3A0A075B645 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms