Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trav8n-2A0A075B633 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.68■■□□□ 1.06
Trav8n-2A0A075B633 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trav8n-2A0A075B633 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trav8n-2A0A075B633 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.66■■□□□ 1.06
Trav8n-2A0A075B633 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trav8n-2A0A075B633 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trav8n-2A0A075B633 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Trav8n-2A0A075B633 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trav8n-2A0A075B633 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Trav8n-2A0A075B633 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Trav8n-2A0A075B633 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trav8n-2A0A075B633 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trav8n-2A0A075B633 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trav8n-2A0A075B633 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trav8n-2A0A075B633 Gm14523-201ENSMUST00000117260 558 ntBASIC21.63■■□□□ 1.05
Trav8n-2A0A075B633 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trav8n-2A0A075B633 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trav8n-2A0A075B633 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trav8n-2A0A075B633 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trav8n-2A0A075B633 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trav8n-2A0A075B633 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.62■■□□□ 1.05
Trav8n-2A0A075B633 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Trav8n-2A0A075B633 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.61■■□□□ 1.05
Trav8n-2A0A075B633 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trav8n-2A0A075B633 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Trav8n-2A0A075B633 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Trav8n-2A0A075B633 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trav8n-2A0A075B633 Gm9812-201ENSMUST00000061934 968 ntBASIC21.6■■□□□ 1.05
Trav8n-2A0A075B633 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trav8n-2A0A075B633 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trav8n-2A0A075B633 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trav8n-2A0A075B633 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.59■■□□□ 1.05
Trav8n-2A0A075B633 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trav8n-2A0A075B633 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trav8n-2A0A075B633 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
Trav8n-2A0A075B633 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trav8n-2A0A075B633 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Trav8n-2A0A075B633 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.58■■□□□ 1.05
Trav8n-2A0A075B633 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trav8n-2A0A075B633 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.57■■□□□ 1.04
Trav8n-2A0A075B633 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Trav8n-2A0A075B633 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trav8n-2A0A075B633 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Trav8n-2A0A075B633 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trav8n-2A0A075B633 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trav8n-2A0A075B633 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.56■■□□□ 1.04
Trav8n-2A0A075B633 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
Trav8n-2A0A075B633 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trav8n-2A0A075B633 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trav8n-2A0A075B633 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Trav8n-2A0A075B633 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trav8n-2A0A075B633 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
Trav8n-2A0A075B633 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trav8n-2A0A075B633 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Trav8n-2A0A075B633 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.54■■□□□ 1.04
Trav8n-2A0A075B633 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trav8n-2A0A075B633 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.53■■□□□ 1.04
Trav8n-2A0A075B633 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trav8n-2A0A075B633 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trav8n-2A0A075B633 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trav8n-2A0A075B633 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trav8n-2A0A075B633 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.52■■□□□ 1.04
Trav8n-2A0A075B633 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.52■■□□□ 1.04
Trav8n-2A0A075B633 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Trav8n-2A0A075B633 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
Trav8n-2A0A075B633 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trav8n-2A0A075B633 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trav8n-2A0A075B633 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.51■■□□□ 1.03
Trav8n-2A0A075B633 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Trav8n-2A0A075B633 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trav8n-2A0A075B633 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trav8n-2A0A075B633 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trav8n-2A0A075B633 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trav8n-2A0A075B633 Zxda-201ENSMUST00000117281 2621 ntBASIC21.48■■□□□ 1.03
Trav8n-2A0A075B633 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.48■■□□□ 1.03
Trav8n-2A0A075B633 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.48■■□□□ 1.03
Trav8n-2A0A075B633 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trav8n-2A0A075B633 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.48■■□□□ 1.03
Trav8n-2A0A075B633 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trav8n-2A0A075B633 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.47■■□□□ 1.03
Trav8n-2A0A075B633 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trav8n-2A0A075B633 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.46■■□□□ 1.03
Trav8n-2A0A075B633 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Trav8n-2A0A075B633 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trav8n-2A0A075B633 Gm10420-201ENSMUST00000121713 882 ntBASIC21.44■■□□□ 1.02
Trav8n-2A0A075B633 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Trav8n-2A0A075B633 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trav8n-2A0A075B633 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trav8n-2A0A075B633 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Trav8n-2A0A075B633 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trav8n-2A0A075B633 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trav8n-2A0A075B633 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.42■■□□□ 1.02
Trav8n-2A0A075B633 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trav8n-2A0A075B633 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trav8n-2A0A075B633 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trav8n-2A0A075B633 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trav8n-2A0A075B633 Terc-201ENSMUST00000082862 423 ntBASIC21.41■■□□□ 1.02
Trav8n-2A0A075B633 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Trav8n-2A0A075B633 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 113.2 ms