Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav6-1A0A075B5Z8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trav6-1A0A075B5Z8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.71■□□□□ 0.58
Trav6-1A0A075B5Z8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Trav6-1A0A075B5Z8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav6-1A0A075B5Z8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trav6-1A0A075B5Z8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.7■□□□□ 0.58
Trav6-1A0A075B5Z8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav6-1A0A075B5Z8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav6-1A0A075B5Z8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Trav6-1A0A075B5Z8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trav6-1A0A075B5Z8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav6-1A0A075B5Z8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trav6-1A0A075B5Z8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trav6-1A0A075B5Z8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trav6-1A0A075B5Z8 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trav6-1A0A075B5Z8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.68■□□□□ 0.58
Trav6-1A0A075B5Z8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trav6-1A0A075B5Z8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav6-1A0A075B5Z8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.67■□□□□ 0.58
Trav6-1A0A075B5Z8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav6-1A0A075B5Z8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav6-1A0A075B5Z8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trav6-1A0A075B5Z8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav6-1A0A075B5Z8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trav6-1A0A075B5Z8 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trav6-1A0A075B5Z8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trav6-1A0A075B5Z8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Trav6-1A0A075B5Z8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav6-1A0A075B5Z8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Trav6-1A0A075B5Z8 Gm30023-201ENSMUST00000197970 889 ntBASIC18.64■□□□□ 0.57
Trav6-1A0A075B5Z8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trav6-1A0A075B5Z8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav6-1A0A075B5Z8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav6-1A0A075B5Z8 Zfp131-205ENSMUST00000223812 663 ntBASIC18.63■□□□□ 0.57
Trav6-1A0A075B5Z8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Trav6-1A0A075B5Z8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav6-1A0A075B5Z8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trav6-1A0A075B5Z8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trav6-1A0A075B5Z8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav6-1A0A075B5Z8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trav6-1A0A075B5Z8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trav6-1A0A075B5Z8 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.6■□□□□ 0.57
Trav6-1A0A075B5Z8 Gm24970-201ENSMUST00000175582 82 ntBASIC18.6■□□□□ 0.57
Trav6-1A0A075B5Z8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.6■□□□□ 0.57
Trav6-1A0A075B5Z8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.6■□□□□ 0.57
Trav6-1A0A075B5Z8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav6-1A0A075B5Z8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav6-1A0A075B5Z8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav6-1A0A075B5Z8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav6-1A0A075B5Z8 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.58■□□□□ 0.57
Trav6-1A0A075B5Z8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav6-1A0A075B5Z8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.57■□□□□ 0.56
Trav6-1A0A075B5Z8 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav6-1A0A075B5Z8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trav6-1A0A075B5Z8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.57■□□□□ 0.56
Trav6-1A0A075B5Z8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
Trav6-1A0A075B5Z8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav6-1A0A075B5Z8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trav6-1A0A075B5Z8 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trav6-1A0A075B5Z8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav6-1A0A075B5Z8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav6-1A0A075B5Z8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav6-1A0A075B5Z8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav6-1A0A075B5Z8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.55■□□□□ 0.56
Trav6-1A0A075B5Z8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav6-1A0A075B5Z8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav6-1A0A075B5Z8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trav6-1A0A075B5Z8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav6-1A0A075B5Z8 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav6-1A0A075B5Z8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav6-1A0A075B5Z8 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav6-1A0A075B5Z8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Trav6-1A0A075B5Z8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Trav6-1A0A075B5Z8 Gm9397-201ENSMUST00000200125 605 ntBASIC18.54■□□□□ 0.56
Trav6-1A0A075B5Z8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav6-1A0A075B5Z8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav6-1A0A075B5Z8 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trav6-1A0A075B5Z8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trav6-1A0A075B5Z8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav6-1A0A075B5Z8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Trav6-1A0A075B5Z8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
Trav6-1A0A075B5Z8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trav6-1A0A075B5Z8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav6-1A0A075B5Z8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav6-1A0A075B5Z8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Trav6-1A0A075B5Z8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.51■□□□□ 0.55
Trav6-1A0A075B5Z8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav6-1A0A075B5Z8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav6-1A0A075B5Z8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav6-1A0A075B5Z8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.5■□□□□ 0.55
Trav6-1A0A075B5Z8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Trav6-1A0A075B5Z8 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.5■□□□□ 0.55
Trav6-1A0A075B5Z8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav6-1A0A075B5Z8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav6-1A0A075B5Z8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.49■□□□□ 0.55
Trav6-1A0A075B5Z8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.49■□□□□ 0.55
Trav6-1A0A075B5Z8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Trav6-1A0A075B5Z8 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trav6-1A0A075B5Z8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 790.9 ms