Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
EPHB3P54753 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.7□□□□□ -1.66
EPHB3P54753 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
EPHB3P54753 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
EPHB3P54753 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
EPHB3P54753 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.69□□□□□ -1.66
EPHB3P54753 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
EPHB3P54753 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
EPHB3P54753 MTND5P30-201ENST00000452896 1731 ntBASIC4.69□□□□□ -1.66
EPHB3P54753 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
EPHB3P54753 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
EPHB3P54753 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.69□□□□□ -1.66
EPHB3P54753 AP001642.1-201ENST00000624727 2117 ntBASIC4.69□□□□□ -1.66
EPHB3P54753 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
EPHB3P54753 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
EPHB3P54753 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.69□□□□□ -1.66
EPHB3P54753 RNU6-1252P-201ENST00000363054 104 ntBASIC4.69□□□□□ -1.66
EPHB3P54753 RNU6-97P-201ENST00000363387 104 ntBASIC4.69□□□□□ -1.66
EPHB3P54753 RNU6-511P-201ENST00000363496 107 ntBASIC4.69□□□□□ -1.66
EPHB3P54753 RNU6-593P-201ENST00000364716 112 ntBASIC4.69□□□□□ -1.66
EPHB3P54753 SNORA70C-201ENST00000384538 135 ntBASIC4.69□□□□□ -1.66
EPHB3P54753 SOD2P1-201ENST00000396543 562 ntBASIC4.69□□□□□ -1.66
EPHB3P54753 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.69□□□□□ -1.66
EPHB3P54753 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.69□□□□□ -1.66
EPHB3P54753 OR2AS1P-201ENST00000427827 319 ntBASIC4.69□□□□□ -1.66
EPHB3P54753 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.69□□□□□ -1.66
EPHB3P54753 AC005019.1-201ENST00000436455 431 ntBASIC4.69□□□□□ -1.66
EPHB3P54753 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC4.69□□□□□ -1.66
EPHB3P54753 RPS24P13-201ENST00000442520 397 ntBASIC4.69□□□□□ -1.66
EPHB3P54753 RPS26P56-201ENST00000444468 240 ntBASIC4.69□□□□□ -1.66
EPHB3P54753 PTMAP3-201ENST00000447474 330 ntBASIC4.69□□□□□ -1.66
EPHB3P54753 NUTF2P7-201ENST00000453086 375 ntBASIC4.69□□□□□ -1.66
EPHB3P54753 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
EPHB3P54753 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.69□□□□□ -1.66
EPHB3P54753 snoU13.8-201ENST00000458890 104 ntBASIC4.69□□□□□ -1.66
EPHB3P54753 AC105137.1-201ENST00000484355 562 ntBASIC4.69□□□□□ -1.66
EPHB3P54753 AC110794.1-201ENST00000505816 425 ntBASIC4.69□□□□□ -1.66
EPHB3P54753 AC107222.1-201ENST00000510899 637 ntBASIC4.69□□□□□ -1.66
EPHB3P54753 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.69□□□□□ -1.66
EPHB3P54753 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.69□□□□□ -1.66
EPHB3P54753 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.69□□□□□ -1.66
EPHB3P54753 AC023442.1-201ENST00000531247 422 ntBASIC4.69□□□□□ -1.66
EPHB3P54753 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.69□□□□□ -1.66
EPHB3P54753 AC015912.2-201ENST00000571053 181 ntBASIC4.69□□□□□ -1.66
EPHB3P54753 MIR4716-201ENST00000579628 84 ntBASIC4.69□□□□□ -1.66
EPHB3P54753 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.69□□□□□ -1.66
EPHB3P54753 AL020997.2-201ENST00000602607 184 ntBASIC4.69□□□□□ -1.66
EPHB3P54753 AC113403.1-201ENST00000604910 193 ntBASIC4.69□□□□□ -1.66
EPHB3P54753 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.69□□□□□ -1.66
EPHB3P54753 AC068724.3-201ENST00000625906 87 ntBASIC4.69□□□□□ -1.66
EPHB3P54753 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
EPHB3P54753 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
EPHB3P54753 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
EPHB3P54753 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
EPHB3P54753 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
EPHB3P54753 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.69□□□□□ -1.66
EPHB3P54753 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
EPHB3P54753 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
EPHB3P54753 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
EPHB3P54753 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.68□□□□□ -1.66
EPHB3P54753 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
EPHB3P54753 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
EPHB3P54753 Y_RNA.153-201ENST00000363615 91 ntBASIC4.68□□□□□ -1.66
EPHB3P54753 RN7SKP224-201ENST00000364140 325 ntBASIC4.68□□□□□ -1.66
EPHB3P54753 RNA5SP366-201ENST00000365454 123 ntBASIC4.68□□□□□ -1.66
EPHB3P54753 UBBP2-201ENST00000376781 231 ntBASIC4.68□□□□□ -1.66
EPHB3P54753 RNU6-641P-201ENST00000384006 107 ntBASIC4.68□□□□□ -1.66
EPHB3P54753 Y_RNA.455-201ENST00000384230 98 ntBASIC4.68□□□□□ -1.66
EPHB3P54753 Y_RNA.463-201ENST00000384271 102 ntBASIC4.68□□□□□ -1.66
EPHB3P54753 RNY1P14-201ENST00000384426 108 ntBASIC4.68□□□□□ -1.66
EPHB3P54753 MIR19A-201ENST00000384878 82 ntBASIC4.68□□□□□ -1.66
EPHB3P54753 MIR3065-201ENST00000390137 79 ntBASIC4.68□□□□□ -1.66
EPHB3P54753 AL359643.1-201ENST00000404109 423 ntBASIC4.68□□□□□ -1.66
EPHB3P54753 RPL23AP26-201ENST00000412728 464 ntBASIC4.68□□□□□ -1.66
EPHB3P54753 RPS20P1-201ENST00000434853 354 ntBASIC4.68□□□□□ -1.66
EPHB3P54753 UBE2V1P13-201ENST00000436983 439 ntBASIC4.68□□□□□ -1.66
EPHB3P54753 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.68□□□□□ -1.66
EPHB3P54753 AC009963.2-201ENST00000453431 138 ntBASIC4.68□□□□□ -1.66
EPHB3P54753 AC108059.3-201ENST00000456388 214 ntBASIC4.68□□□□□ -1.66
EPHB3P54753 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.68□□□□□ -1.66
EPHB3P54753 AC079804.1-201ENST00000461922 436 ntBASIC4.68□□□□□ -1.66
EPHB3P54753 RPL5P30-201ENST00000465511 891 ntBASIC4.68□□□□□ -1.66
EPHB3P54753 UQCRHP4-201ENST00000471686 272 ntBASIC4.68□□□□□ -1.66
EPHB3P54753 RNU6-1213P-201ENST00000517075 94 ntBASIC4.68□□□□□ -1.66
EPHB3P54753 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.68□□□□□ -1.66
EPHB3P54753 AL137161.1-201ENST00000532231 390 ntBASIC4.68□□□□□ -1.66
EPHB3P54753 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.68□□□□□ -1.66
EPHB3P54753 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.68□□□□□ -1.66
EPHB3P54753 AC090615.1-201ENST00000577519 154 ntBASIC4.68□□□□□ -1.66
EPHB3P54753 AC138761.3-201ENST00000579993 334 ntBASIC4.68□□□□□ -1.66
EPHB3P54753 MIR5583-1-201ENST00000580941 59 ntBASIC4.68□□□□□ -1.66
EPHB3P54753 AC005357.1-201ENST00000588399 301 ntBASIC4.68□□□□□ -1.66
EPHB3P54753 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.68□□□□□ -1.66
EPHB3P54753 AC000123.2-201ENST00000623124 461 ntBASIC4.68□□□□□ -1.66
EPHB3P54753 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
EPHB3P54753 KPNA2P1-201ENST00000458289 1591 ntBASIC4.68□□□□□ -1.66
EPHB3P54753 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
EPHB3P54753 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.68□□□□□ -1.66
EPHB3P54753 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.68□□□□□ -1.66
EPHB3P54753 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 175.2 ms