Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PCDHB9Q9Y5E1 SNORA69.1-201ENST00000390904 137 ntBASIC5.67□□□□□ -1.5
PCDHB9Q9Y5E1 RNU6-1203P-201ENST00000410703 110 ntBASIC5.67□□□□□ -1.5
PCDHB9Q9Y5E1 RN7SKP213-201ENST00000410746 298 ntBASIC5.67□□□□□ -1.5
PCDHB9Q9Y5E1 RNU2-14P-201ENST00000411053 191 ntBASIC5.67□□□□□ -1.5
PCDHB9Q9Y5E1 RNU6-130P-201ENST00000411112 103 ntBASIC5.67□□□□□ -1.5
PCDHB9Q9Y5E1 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHB9Q9Y5E1 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDHB9Q9Y5E1 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHB9Q9Y5E1 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHB9Q9Y5E1 AC092423.1-201ENST00000430165 186 ntBASIC5.67□□□□□ -1.5
PCDHB9Q9Y5E1 TMEM183AP1-205ENST00000432739 290 ntBASIC5.67□□□□□ -1.5
PCDHB9Q9Y5E1 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHB9Q9Y5E1 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHB9Q9Y5E1 EIF4A1P11-201ENST00000451239 222 ntBASIC5.67□□□□□ -1.5
PCDHB9Q9Y5E1 snoU13.29-201ENST00000459370 104 ntBASIC5.67□□□□□ -1.5
PCDHB9Q9Y5E1 AC005532.2-201ENST00000467154 373 ntBASIC5.67□□□□□ -1.5
PCDHB9Q9Y5E1 AC007686.1-201ENST00000488511 463 ntBASIC5.67□□□□□ -1.5
PCDHB9Q9Y5E1 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHB9Q9Y5E1 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHB9Q9Y5E1 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHB9Q9Y5E1 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.67□□□□□ -1.5
PCDHB9Q9Y5E1 AC005951.2-201ENST00000576282 495 ntBASIC5.67□□□□□ -1.5
PCDHB9Q9Y5E1 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHB9Q9Y5E1 AL355877.2-201ENST00000603670 358 ntBASIC5.67□□□□□ -1.5
PCDHB9Q9Y5E1 AC008814.1-201ENST00000603797 406 ntBASIC5.67□□□□□ -1.5
PCDHB9Q9Y5E1 AC123912.5-201ENST00000605470 343 ntBASIC5.67□□□□□ -1.5
PCDHB9Q9Y5E1 AL121917.1-203ENST00000605534 577 ntBASIC5.67□□□□□ -1.5
PCDHB9Q9Y5E1 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHB9Q9Y5E1 AL731566.2-201ENST00000618971 317 ntBASIC5.67□□□□□ -1.5
PCDHB9Q9Y5E1 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHB9Q9Y5E1 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PCDHB9Q9Y5E1 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHB9Q9Y5E1 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 MIR335-201ENST00000362173 94 ntBASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 Y_RNA.29-201ENST00000362570 113 ntBASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 RNA5SP326-201ENST00000363209 110 ntBASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 SNORA19-201ENST00000384737 128 ntBASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 AC005042.1-201ENST00000393397 800 ntBASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 MRPS21P2-201ENST00000424704 264 ntBASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 RPL7L1P9-201ENST00000431298 745 ntBASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 RANP8-201ENST00000444720 713 ntBASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 AC108161.1-201ENST00000461060 402 ntBASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 MED28P2-201ENST00000475771 317 ntBASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 RPSAP50-201ENST00000481955 852 ntBASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 SUMO2P6-201ENST00000505273 288 ntBASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 RNA5SP228-201ENST00000516232 133 ntBASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 AC126177.3-201ENST00000551839 688 ntBASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 MRPS21P7-201ENST00000566937 238 ntBASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 AC130289.1-201ENST00000577321 73 ntBASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 AC067852.4-201ENST00000590314 478 ntBASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 Mico1.1-201ENST00000611698 204 ntBASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 AC144833.1-201ENST00000567953 4089 ntBASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHB9Q9Y5E1 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.65□□□□□ -1.5
PCDHB9Q9Y5E1 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHB9Q9Y5E1 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHB9Q9Y5E1 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.65□□□□□ -1.5
PCDHB9Q9Y5E1 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.65□□□□□ -1.5
PCDHB9Q9Y5E1 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHB9Q9Y5E1 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHB9Q9Y5E1 AC232271.1-201ENST00000602455 2715 ntBASIC5.65□□□□□ -1.5
PCDHB9Q9Y5E1 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHB9Q9Y5E1 RNU1-76P-201ENST00000362903 159 ntBASIC5.65□□□□□ -1.5
PCDHB9Q9Y5E1 Y_RNA.84-201ENST00000363011 104 ntBASIC5.65□□□□□ -1.5
PCDHB9Q9Y5E1 RN7SKP103-201ENST00000363848 320 ntBASIC5.65□□□□□ -1.5
PCDHB9Q9Y5E1 U3.10-201ENST00000364459 214 ntBASIC5.65□□□□□ -1.5
PCDHB9Q9Y5E1 RNU6-1179P-201ENST00000384667 107 ntBASIC5.65□□□□□ -1.5
PCDHB9Q9Y5E1 RNU6-882P-201ENST00000391025 103 ntBASIC5.65□□□□□ -1.5
PCDHB9Q9Y5E1 Y_RNA.592-201ENST00000410274 109 ntBASIC5.65□□□□□ -1.5
PCDHB9Q9Y5E1 AF186996.5-201ENST00000418098 904 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 185.6 ms