Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 RNU6-799P-201ENST00000363567 107 ntBASIC2.98□□□□□ -1.93
HDAC3O15379 SUGT1P1-201ENST00000379514 476 ntBASIC2.98□□□□□ -1.93
HDAC3O15379 RNU6-657P-201ENST00000383904 107 ntBASIC2.98□□□□□ -1.93
HDAC3O15379 RNU6-444P-201ENST00000383988 108 ntBASIC2.98□□□□□ -1.93
HDAC3O15379 SNORD116-8-201ENST00000384365 95 ntBASIC2.98□□□□□ -1.93
HDAC3O15379 MIR23B-201ENST00000384832 97 ntBASIC2.98□□□□□ -1.93
HDAC3O15379 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
HDAC3O15379 MIR1289-1-201ENST00000408836 144 ntBASIC2.98□□□□□ -1.93
HDAC3O15379 RAP1BP1-201ENST00000412709 553 ntBASIC2.98□□□□□ -1.93
HDAC3O15379 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.98□□□□□ -1.93
HDAC3O15379 AC008280.1-201ENST00000418851 412 ntBASIC2.98□□□□□ -1.93
HDAC3O15379 MTND2P18-201ENST00000419962 1030 ntBASIC2.98□□□□□ -1.93
HDAC3O15379 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.98□□□□□ -1.93
HDAC3O15379 AC069157.1-201ENST00000421749 137 ntBASIC2.98□□□□□ -1.93
HDAC3O15379 AL139421.1-201ENST00000423010 169 ntBASIC2.98□□□□□ -1.93
HDAC3O15379 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.98□□□□□ -1.93
HDAC3O15379 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.98□□□□□ -1.93
HDAC3O15379 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.98□□□□□ -1.93
HDAC3O15379 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.98□□□□□ -1.93
HDAC3O15379 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.98□□□□□ -1.93
HDAC3O15379 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.98□□□□□ -1.93
HDAC3O15379 ATG12P2-201ENST00000456830 416 ntBASIC2.98□□□□□ -1.93
HDAC3O15379 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.98□□□□□ -1.93
HDAC3O15379 RPS3AP22-201ENST00000488297 769 ntBASIC2.98□□□□□ -1.93
HDAC3O15379 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.98□□□□□ -1.93
HDAC3O15379 HSPE1P23-201ENST00000509838 286 ntBASIC2.98□□□□□ -1.93
HDAC3O15379 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.98□□□□□ -1.93
HDAC3O15379 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.98□□□□□ -1.93
HDAC3O15379 AC105914.1-201ENST00000511798 226 ntBASIC2.98□□□□□ -1.93
HDAC3O15379 SNORA3.4-201ENST00000515969 96 ntBASIC2.98□□□□□ -1.93
HDAC3O15379 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.98□□□□□ -1.93
HDAC3O15379 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.98□□□□□ -1.93
HDAC3O15379 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.98□□□□□ -1.93
HDAC3O15379 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.98□□□□□ -1.93
HDAC3O15379 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.98□□□□□ -1.93
HDAC3O15379 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.98□□□□□ -1.93
HDAC3O15379 BNIP3P26-201ENST00000600827 554 ntBASIC2.98□□□□□ -1.93
HDAC3O15379 AC012119.1-201ENST00000603184 222 ntBASIC2.98□□□□□ -1.93
HDAC3O15379 AC007566.2-201ENST00000603642 413 ntBASIC2.98□□□□□ -1.93
HDAC3O15379 AL358072.1-201ENST00000604156 575 ntBASIC2.98□□□□□ -1.93
HDAC3O15379 AL133507.1-201ENST00000605269 557 ntBASIC2.98□□□□□ -1.93
HDAC3O15379 HSPE1P14-201ENST00000605812 302 ntBASIC2.98□□□□□ -1.93
HDAC3O15379 AL360219.1-201ENST00000610230 366 ntBASIC2.98□□□□□ -1.93
HDAC3O15379 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HDAC3O15379 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.98□□□□□ -1.93
HDAC3O15379 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
HDAC3O15379 MKKS-204ENST00000639674 192 ntBASIC2.98□□□□□ -1.93
HDAC3O15379 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.98□□□□□ -1.93
HDAC3O15379 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.98□□□□□ -1.93
HDAC3O15379 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
HDAC3O15379 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.98□□□□□ -1.93
HDAC3O15379 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
HDAC3O15379 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HDAC3O15379 RNU6-115P-201ENST00000364310 107 ntBASIC2.97□□□□□ -1.93
HDAC3O15379 DSTNP4-201ENST00000399472 474 ntBASIC2.97□□□□□ -1.93
HDAC3O15379 RPL7P25-201ENST00000404151 721 ntBASIC2.97□□□□□ -1.93
HDAC3O15379 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HDAC3O15379 OR1AA1P-201ENST00000419597 916 ntBASIC2.97□□□□□ -1.93
HDAC3O15379 AL365338.1-201ENST00000422282 858 ntBASIC2.97□□□□□ -1.93
HDAC3O15379 RPL31P54-201ENST00000429803 370 ntBASIC2.97□□□□□ -1.93
HDAC3O15379 AL513175.1-201ENST00000431492 780 ntBASIC2.97□□□□□ -1.93
HDAC3O15379 UBE2D3P1-201ENST00000436669 444 ntBASIC2.97□□□□□ -1.93
HDAC3O15379 MTND3P1-201ENST00000441336 220 ntBASIC2.97□□□□□ -1.93
HDAC3O15379 AL133217.1-201ENST00000450980 425 ntBASIC2.97□□□□□ -1.93
HDAC3O15379 NDUFA5P7-201ENST00000452914 242 ntBASIC2.97□□□□□ -1.93
HDAC3O15379 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.97□□□□□ -1.93
HDAC3O15379 AC010301.1-201ENST00000473936 355 ntBASIC2.97□□□□□ -1.93
HDAC3O15379 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.97□□□□□ -1.93
HDAC3O15379 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.97□□□□□ -1.93
HDAC3O15379 AC110794.1-201ENST00000505816 425 ntBASIC2.97□□□□□ -1.93
HDAC3O15379 AC079395.1-201ENST00000510981 262 ntBASIC2.97□□□□□ -1.93
HDAC3O15379 AC010587.2-201ENST00000511727 448 ntBASIC2.97□□□□□ -1.93
HDAC3O15379 MRPS33P3-201ENST00000513456 322 ntBASIC2.97□□□□□ -1.93
HDAC3O15379 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.97□□□□□ -1.93
HDAC3O15379 RNY4P37-201ENST00000516225 96 ntBASIC2.97□□□□□ -1.93
HDAC3O15379 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.97□□□□□ -1.93
HDAC3O15379 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.97□□□□□ -1.93
HDAC3O15379 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC2.97□□□□□ -1.93
HDAC3O15379 AC007458.1-201ENST00000542812 373 ntBASIC2.97□□□□□ -1.93
HDAC3O15379 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.97□□□□□ -1.93
HDAC3O15379 SERPINE4P-201ENST00000554978 281 ntBASIC2.97□□□□□ -1.93
HDAC3O15379 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.97□□□□□ -1.93
HDAC3O15379 AC087465.1-201ENST00000560574 245 ntBASIC2.97□□□□□ -1.93
HDAC3O15379 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.97□□□□□ -1.93
HDAC3O15379 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.97□□□□□ -1.93
HDAC3O15379 MIR3922-201ENST00000585192 84 ntBASIC2.97□□□□□ -1.93
HDAC3O15379 AC083760.1-201ENST00000589621 670 ntBASIC2.97□□□□□ -1.93
HDAC3O15379 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.97□□□□□ -1.93
HDAC3O15379 CKS1BP3-201ENST00000600888 237 ntBASIC2.97□□□□□ -1.93
HDAC3O15379 PRELID3BP8-201ENST00000604148 295 ntBASIC2.97□□□□□ -1.93
HDAC3O15379 AC019159.1-201ENST00000605094 187 ntBASIC2.97□□□□□ -1.93
HDAC3O15379 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.97□□□□□ -1.93
HDAC3O15379 AC078883.4-201ENST00000623218 367 ntBASIC2.97□□□□□ -1.93
HDAC3O15379 AC026422.1-201ENST00000623961 452 ntBASIC2.97□□□□□ -1.93
HDAC3O15379 AC007490.1-201ENST00000624321 703 ntBASIC2.97□□□□□ -1.93
HDAC3O15379 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.97□□□□□ -1.93
HDAC3O15379 AC068620.4-201ENST00000636730 1182 ntBASIC2.97□□□□□ -1.93
HDAC3O15379 LRRC77P-213ENST00000637727 880 ntBASIC2.97□□□□□ -1.93
HDAC3O15379 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.97□□□□□ -1.93
HDAC3O15379 OR8B1P-202ENST00000641132 1178 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 190.3 ms