Protein–RNA interactions for Protein: Q8CDN1

Uncharacterized protein C3orf20 homolog, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CDN1 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q8CDN1 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q8CDN1 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Q8CDN1 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q8CDN1 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Q8CDN1 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Q8CDN1 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q8CDN1 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Q8CDN1 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Q8CDN1 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.79■□□□□ 0.28
Q8CDN1 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q8CDN1 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q8CDN1 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q8CDN1 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q8CDN1 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Q8CDN1 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q8CDN1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q8CDN1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q8CDN1 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q8CDN1 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q8CDN1 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q8CDN1 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Q8CDN1 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Q8CDN1 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Q8CDN1 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Q8CDN1 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Q8CDN1 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.78■□□□□ 0.28
Q8CDN1 Gm44357-201ENSMUST00000195897 142 ntBASIC16.78■□□□□ 0.28
Q8CDN1 Gm19658-201ENSMUST00000196231 138 ntBASIC16.78■□□□□ 0.28
Q8CDN1 Gm44367-201ENSMUST00000196836 138 ntBASIC16.78■□□□□ 0.28
Q8CDN1 Gm44350-201ENSMUST00000197197 138 ntBASIC16.78■□□□□ 0.28
Q8CDN1 Gm44390-201ENSMUST00000197533 144 ntBASIC16.78■□□□□ 0.28
Q8CDN1 Gm44313-201ENSMUST00000198018 138 ntBASIC16.78■□□□□ 0.28
Q8CDN1 Gm44486-201ENSMUST00000198508 138 ntBASIC16.78■□□□□ 0.28
Q8CDN1 Gm44314-201ENSMUST00000199263 138 ntBASIC16.78■□□□□ 0.28
Q8CDN1 Gm44394-201ENSMUST00000199558 138 ntBASIC16.78■□□□□ 0.28
Q8CDN1 Gm44484-201ENSMUST00000199873 138 ntBASIC16.78■□□□□ 0.28
Q8CDN1 Gm44466-201ENSMUST00000200264 138 ntBASIC16.78■□□□□ 0.28
Q8CDN1 Gm44359-201ENSMUST00000200671 138 ntBASIC16.78■□□□□ 0.28
Q8CDN1 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Q8CDN1 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Q8CDN1 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Q8CDN1 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Q8CDN1 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Q8CDN1 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Q8CDN1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Q8CDN1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Q8CDN1 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Q8CDN1 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Q8CDN1 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.78■□□□□ 0.28
Q8CDN1 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Q8CDN1 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Q8CDN1 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Q8CDN1 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Q8CDN1 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Q8CDN1 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Q8CDN1 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Q8CDN1 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Q8CDN1 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Q8CDN1 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Q8CDN1 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Q8CDN1 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Q8CDN1 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Q8CDN1 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.77■□□□□ 0.28
Q8CDN1 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Q8CDN1 Gm44771-201ENSMUST00000206975 626 ntBASIC16.77■□□□□ 0.28
Q8CDN1 Gm6296-201ENSMUST00000222599 943 ntBASIC16.77■□□□□ 0.28
Q8CDN1 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Q8CDN1 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Q8CDN1 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Q8CDN1 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Q8CDN1 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Q8CDN1 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Q8CDN1 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Q8CDN1 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Q8CDN1 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q8CDN1 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q8CDN1 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q8CDN1 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q8CDN1 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q8CDN1 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Q8CDN1 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q8CDN1 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Q8CDN1 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.76■□□□□ 0.27
Q8CDN1 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Q8CDN1 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Q8CDN1 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q8CDN1 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.76■□□□□ 0.27
Q8CDN1 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.76■□□□□ 0.27
Q8CDN1 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.76■□□□□ 0.27
Q8CDN1 Gm25745-201ENSMUST00000174945 133 ntBASIC16.76■□□□□ 0.27
Q8CDN1 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.76■□□□□ 0.27
Q8CDN1 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Q8CDN1 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Q8CDN1 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Q8CDN1 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q8CDN1 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q8CDN1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q8CDN1 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q8CDN1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms