Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.35■□□□□ 0.37
Trim43aQ3TL54 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Trim43aQ3TL54 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim43aQ3TL54 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim43aQ3TL54 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim43aQ3TL54 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim43aQ3TL54 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim43aQ3TL54 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim43aQ3TL54 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim43aQ3TL54 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim43aQ3TL54 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim43aQ3TL54 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim43aQ3TL54 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim43aQ3TL54 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim43aQ3TL54 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.35■□□□□ 0.37
Trim43aQ3TL54 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim43aQ3TL54 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim43aQ3TL54 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim43aQ3TL54 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.34■□□□□ 0.37
Trim43aQ3TL54 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Trim43aQ3TL54 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim43aQ3TL54 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim43aQ3TL54 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim43aQ3TL54 Gm38027-201ENSMUST00000192315 235 ntBASIC17.34■□□□□ 0.37
Trim43aQ3TL54 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.34■□□□□ 0.37
Trim43aQ3TL54 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Trim43aQ3TL54 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.34■□□□□ 0.37
Trim43aQ3TL54 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim43aQ3TL54 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim43aQ3TL54 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim43aQ3TL54 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim43aQ3TL54 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Trim43aQ3TL54 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trim43aQ3TL54 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim43aQ3TL54 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim43aQ3TL54 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim43aQ3TL54 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.37
Trim43aQ3TL54 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trim43aQ3TL54 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim43aQ3TL54 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim43aQ3TL54 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim43aQ3TL54 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim43aQ3TL54 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Trim43aQ3TL54 Gm715-201ENSMUST00000117865 831 ntBASIC17.33■□□□□ 0.36
Trim43aQ3TL54 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.33■□□□□ 0.36
Trim43aQ3TL54 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim43aQ3TL54 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim43aQ3TL54 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Trim43aQ3TL54 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Trim43aQ3TL54 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim43aQ3TL54 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim43aQ3TL54 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim43aQ3TL54 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim43aQ3TL54 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.33■□□□□ 0.36
Trim43aQ3TL54 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Trim43aQ3TL54 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim43aQ3TL54 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim43aQ3TL54 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim43aQ3TL54 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim43aQ3TL54 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Trim43aQ3TL54 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43aQ3TL54 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trim43aQ3TL54 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43aQ3TL54 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43aQ3TL54 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43aQ3TL54 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.32■□□□□ 0.36
Trim43aQ3TL54 Mir6982-201ENSMUST00000184354 68 ntBASIC17.32■□□□□ 0.36
Trim43aQ3TL54 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Trim43aQ3TL54 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43aQ3TL54 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Trim43aQ3TL54 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.32■□□□□ 0.36
Trim43aQ3TL54 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43aQ3TL54 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43aQ3TL54 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.32■□□□□ 0.36
Trim43aQ3TL54 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim43aQ3TL54 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim43aQ3TL54 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim43aQ3TL54 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim43aQ3TL54 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim43aQ3TL54 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim43aQ3TL54 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim43aQ3TL54 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim43aQ3TL54 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim43aQ3TL54 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim43aQ3TL54 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim43aQ3TL54 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim43aQ3TL54 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim43aQ3TL54 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.31■□□□□ 0.36
Trim43aQ3TL54 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim43aQ3TL54 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim43aQ3TL54 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim43aQ3TL54 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Trim43aQ3TL54 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim43aQ3TL54 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim43aQ3TL54 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim43aQ3TL54 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Trim43aQ3TL54 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim43aQ3TL54 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim43aQ3TL54 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.31■□□□□ 0.36
Trim43aQ3TL54 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 102.1 ms