Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfrsf1aP25118 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfrsf1aP25118 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfrsf1aP25118 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfrsf1aP25118 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC13.71□□□□□ -0.21
Tnfrsf1aP25118 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.71□□□□□ -0.21
Tnfrsf1aP25118 Mir6982-201ENSMUST00000184354 68 ntBASIC13.71□□□□□ -0.21
Tnfrsf1aP25118 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfrsf1aP25118 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfrsf1aP25118 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfrsf1aP25118 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.71□□□□□ -0.22
Tnfrsf1aP25118 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Tnfrsf1aP25118 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tnfrsf1aP25118 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tnfrsf1aP25118 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tnfrsf1aP25118 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tnfrsf1aP25118 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Tnfrsf1aP25118 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Tnfrsf1aP25118 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Tnfrsf1aP25118 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.7□□□□□ -0.22
Tnfrsf1aP25118 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1aP25118 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1aP25118 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1aP25118 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1aP25118 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1aP25118 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1aP25118 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.7□□□□□ -0.22
Tnfrsf1aP25118 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1aP25118 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1aP25118 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1aP25118 Gm11539-201ENSMUST00000119837 557 ntBASIC13.7□□□□□ -0.22
Tnfrsf1aP25118 Gm16061-201ENSMUST00000122167 857 ntBASIC13.7□□□□□ -0.22
Tnfrsf1aP25118 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.7□□□□□ -0.22
Tnfrsf1aP25118 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Tnfrsf1aP25118 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1aP25118 Mir7071-201ENSMUST00000184847 69 ntBASIC13.7□□□□□ -0.22
Tnfrsf1aP25118 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.7□□□□□ -0.22
Tnfrsf1aP25118 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1aP25118 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.7□□□□□ -0.22
Tnfrsf1aP25118 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1aP25118 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1aP25118 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1aP25118 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1aP25118 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1aP25118 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1aP25118 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Tnfrsf1aP25118 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.7□□□□□ -0.22
Tnfrsf1aP25118 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1aP25118 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Tnfrsf1aP25118 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.7□□□□□ -0.22
Tnfrsf1aP25118 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1aP25118 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Tnfrsf1aP25118 Actl10-202ENSMUST00000226583 1501 ntBASIC13.69□□□□□ -0.22
Tnfrsf1aP25118 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Tnfrsf1aP25118 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Tnfrsf1aP25118 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1aP25118 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Tnfrsf1aP25118 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1aP25118 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1aP25118 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1aP25118 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1aP25118 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1aP25118 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.69□□□□□ -0.22
Tnfrsf1aP25118 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1aP25118 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Tnfrsf1aP25118 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1aP25118 Gm13186-201ENSMUST00000118031 316 ntBASIC13.69□□□□□ -0.22
Tnfrsf1aP25118 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.69□□□□□ -0.22
Tnfrsf1aP25118 AL672049.1-201ENSMUST00000197943 91 ntBASIC13.69□□□□□ -0.22
Tnfrsf1aP25118 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1aP25118 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Tnfrsf1aP25118 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1aP25118 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1aP25118 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1aP25118 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1aP25118 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1aP25118 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1aP25118 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.69□□□□□ -0.22
Tnfrsf1aP25118 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1aP25118 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.69□□□□□ -0.22
Tnfrsf1aP25118 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1aP25118 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1aP25118 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1aP25118 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf1aP25118 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf1aP25118 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Tnfrsf1aP25118 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf1aP25118 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Tnfrsf1aP25118 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf1aP25118 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf1aP25118 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf1aP25118 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf1aP25118 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf1aP25118 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf1aP25118 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf1aP25118 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.68□□□□□ -0.22
Tnfrsf1aP25118 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf1aP25118 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf1aP25118 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf1aP25118 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms