Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC24.17■■□□□ 1.46
NclP09405 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
NclP09405 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NclP09405 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC24.17■■□□□ 1.46
NclP09405 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC24.17■■□□□ 1.46
NclP09405 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC24.17■■□□□ 1.46
NclP09405 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC24.17■■□□□ 1.46
NclP09405 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
NclP09405 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NclP09405 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
NclP09405 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
NclP09405 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
NclP09405 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
NclP09405 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC24.16■■□□□ 1.46
NclP09405 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
NclP09405 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
NclP09405 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
NclP09405 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
NclP09405 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
NclP09405 Rps4l-201ENSMUST00000071745 943 ntBASIC24.16■■□□□ 1.46
NclP09405 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC24.16■■□□□ 1.46
NclP09405 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
NclP09405 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
NclP09405 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
NclP09405 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
NclP09405 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC24.15■■□□□ 1.46
NclP09405 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC24.15■■□□□ 1.46
NclP09405 Gm36967-201ENSMUST00000193814 266 ntBASIC24.15■■□□□ 1.46
NclP09405 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC24.15■■□□□ 1.46
NclP09405 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC24.15■■□□□ 1.46
NclP09405 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
NclP09405 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
NclP09405 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NclP09405 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC24.15■■□□□ 1.46
NclP09405 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
NclP09405 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
NclP09405 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NclP09405 Gm16401-202ENSMUST00000197463 2074 ntBASIC24.14■■□□□ 1.46
NclP09405 Gm1818-201ENSMUST00000169406 1184 ntBASIC24.14■■□□□ 1.45
NclP09405 Gm13830-205ENSMUST00000201195 1155 ntBASIC24.14■■□□□ 1.45
NclP09405 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC24.14■■□□□ 1.45
NclP09405 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
NclP09405 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC24.14■■□□□ 1.45
NclP09405 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
NclP09405 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC24.14■■□□□ 1.45
NclP09405 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
NclP09405 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
NclP09405 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
NclP09405 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
NclP09405 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
NclP09405 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
NclP09405 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
NclP09405 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
NclP09405 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
NclP09405 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC24.13■■□□□ 1.45
NclP09405 Gm18195-201ENSMUST00000207604 706 ntBASIC24.13■■□□□ 1.45
NclP09405 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
NclP09405 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
NclP09405 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
NclP09405 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
NclP09405 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
NclP09405 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
NclP09405 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
NclP09405 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
NclP09405 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
NclP09405 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
NclP09405 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
NclP09405 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
NclP09405 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC24.12■■□□□ 1.45
NclP09405 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
NclP09405 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC24.12■■□□□ 1.45
NclP09405 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
NclP09405 AC127349.1-201ENSMUST00000224590 266 ntBASIC24.12■■□□□ 1.45
NclP09405 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
NclP09405 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC24.12■■□□□ 1.45
NclP09405 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC24.12■■□□□ 1.45
NclP09405 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
NclP09405 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
NclP09405 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
NclP09405 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
NclP09405 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
NclP09405 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC24.11■■□□□ 1.45
NclP09405 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
NclP09405 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
NclP09405 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
NclP09405 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
NclP09405 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
NclP09405 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
NclP09405 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
NclP09405 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
NclP09405 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
NclP09405 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
NclP09405 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
NclP09405 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
NclP09405 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
NclP09405 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
NclP09405 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
NclP09405 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
NclP09405 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
NclP09405 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms