Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RNU2-21P-201ENST00000410368 188 ntBASIC5.49□□□□□ -1.53
NFKB1P19838 RNU6-55P-201ENST00000411092 107 ntBASIC5.49□□□□□ -1.53
NFKB1P19838 AC011933.1-201ENST00000413334 321 ntBASIC5.49□□□□□ -1.53
NFKB1P19838 AL360081.1-201ENST00000428299 555 ntBASIC5.49□□□□□ -1.53
NFKB1P19838 AL389925.1-201ENST00000432257 728 ntBASIC5.49□□□□□ -1.53
NFKB1P19838 RPS15AP10-201ENST00000432472 382 ntBASIC5.49□□□□□ -1.53
NFKB1P19838 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.49□□□□□ -1.53
NFKB1P19838 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.49□□□□□ -1.53
NFKB1P19838 RPL21P2-201ENST00000440049 481 ntBASIC5.49□□□□□ -1.53
NFKB1P19838 NOTCH2P1-201ENST00000443481 624 ntBASIC5.49□□□□□ -1.53
NFKB1P19838 AC105399.1-202ENST00000447303 205 ntBASIC5.49□□□□□ -1.53
NFKB1P19838 AL353752.1-201ENST00000454946 260 ntBASIC5.49□□□□□ -1.53
NFKB1P19838 RNU6-1132P-201ENST00000459214 107 ntBASIC5.49□□□□□ -1.53
NFKB1P19838 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.49□□□□□ -1.53
NFKB1P19838 RN7SL273P-201ENST00000481561 299 ntBASIC5.49□□□□□ -1.53
NFKB1P19838 AC026979.1-201ENST00000492525 396 ntBASIC5.49□□□□□ -1.53
NFKB1P19838 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.49□□□□□ -1.53
NFKB1P19838 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NFKB1P19838 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.49□□□□□ -1.53
NFKB1P19838 AC022404.1-201ENST00000555320 273 ntBASIC5.49□□□□□ -1.53
NFKB1P19838 NF1P5-201ENST00000588287 448 ntBASIC5.49□□□□□ -1.53
NFKB1P19838 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC5.49□□□□□ -1.53
NFKB1P19838 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.49□□□□□ -1.53
NFKB1P19838 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.49□□□□□ -1.53
NFKB1P19838 AL670379.6-201ENST00000603753 252 ntBASIC5.49□□□□□ -1.53
NFKB1P19838 AC008162.1-201ENST00000604718 254 ntBASIC5.49□□□□□ -1.53
NFKB1P19838 AL670379.1-201ENST00000604752 252 ntBASIC5.49□□□□□ -1.53
NFKB1P19838 AL670379.5-201ENST00000605253 252 ntBASIC5.49□□□□□ -1.53
NFKB1P19838 AL670379.4-201ENST00000605279 254 ntBASIC5.49□□□□□ -1.53
NFKB1P19838 AL670379.8-201ENST00000605353 252 ntBASIC5.49□□□□□ -1.53
NFKB1P19838 AL670379.7-201ENST00000605823 252 ntBASIC5.49□□□□□ -1.53
NFKB1P19838 AC000068.2-201ENST00000608816 460 ntBASIC5.49□□□□□ -1.53
NFKB1P19838 AL161423.1-201ENST00000613700 262 ntBASIC5.49□□□□□ -1.53
NFKB1P19838 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NFKB1P19838 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NFKB1P19838 AC010329.2-201ENST00000595195 2737 ntBASIC5.49□□□□□ -1.53
NFKB1P19838 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NFKB1P19838 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.49□□□□□ -1.53
NFKB1P19838 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NFKB1P19838 AL022311.1-201ENST00000623726 19416 ntBASIC5.49□□□□□ -1.53
NFKB1P19838 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NFKB1P19838 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
NFKB1P19838 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.48□□□□□ -1.53
NFKB1P19838 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.48□□□□□ -1.53
NFKB1P19838 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
NFKB1P19838 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
NFKB1P19838 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.48□□□□□ -1.53
NFKB1P19838 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.48□□□□□ -1.53
NFKB1P19838 AC116667.1-201ENST00000604855 2072 ntBASIC5.48□□□□□ -1.53
NFKB1P19838 AL031119.1-201ENST00000404707 1879 ntBASIC5.48□□□□□ -1.53
NFKB1P19838 MIR133B-201ENST00000362210 119 ntBASIC5.48□□□□□ -1.53
NFKB1P19838 Y_RNA.2-201ENST00000362330 96 ntBASIC5.48□□□□□ -1.53
NFKB1P19838 RNA5SP319-201ENST00000362768 119 ntBASIC5.48□□□□□ -1.53
NFKB1P19838 RN7SKP124-201ENST00000364730 341 ntBASIC5.48□□□□□ -1.53
NFKB1P19838 SMIM11P1-201ENST00000369586 178 ntBASIC5.48□□□□□ -1.53
NFKB1P19838 RNU6-946P-201ENST00000383878 107 ntBASIC5.48□□□□□ -1.53
NFKB1P19838 RNU6-434P-201ENST00000384376 107 ntBASIC5.48□□□□□ -1.53
NFKB1P19838 AL133388.1-201ENST00000404509 287 ntBASIC5.48□□□□□ -1.53
NFKB1P19838 RN7SKP106-201ENST00000410832 272 ntBASIC5.48□□□□□ -1.53
NFKB1P19838 MRPS18CP6-201ENST00000423587 223 ntBASIC5.48□□□□□ -1.53
NFKB1P19838 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NFKB1P19838 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC5.48□□□□□ -1.53
NFKB1P19838 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.48□□□□□ -1.53
NFKB1P19838 AC245028.2-201ENST00000458673 253 ntBASIC5.48□□□□□ -1.53
NFKB1P19838 RN7SL51P-201ENST00000468230 285 ntBASIC5.48□□□□□ -1.53
NFKB1P19838 AC004453.1-201ENST00000487895 408 ntBASIC5.48□□□□□ -1.53
NFKB1P19838 AC096745.1-201ENST00000509945 370 ntBASIC5.48□□□□□ -1.53
NFKB1P19838 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NFKB1P19838 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.48□□□□□ -1.53
NFKB1P19838 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.48□□□□□ -1.53
NFKB1P19838 DEFB108D-201ENST00000527787 222 ntBASIC5.48□□□□□ -1.53
NFKB1P19838 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.48□□□□□ -1.53
NFKB1P19838 AP000889.1-201ENST00000530968 660 ntBASIC5.48□□□□□ -1.53
NFKB1P19838 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.48□□□□□ -1.53
NFKB1P19838 AC026371.1-201ENST00000551867 419 ntBASIC5.48□□□□□ -1.53
NFKB1P19838 HSBP1P1-201ENST00000555205 166 ntBASIC5.48□□□□□ -1.53
NFKB1P19838 RPL23AP84-201ENST00000571193 464 ntBASIC5.48□□□□□ -1.53
NFKB1P19838 RN7SL356P-201ENST00000582228 248 ntBASIC5.48□□□□□ -1.53
NFKB1P19838 AC125232.2-201ENST00000592457 143 ntBASIC5.48□□□□□ -1.53
NFKB1P19838 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.48□□□□□ -1.53
NFKB1P19838 AC078899.3-201ENST00000599065 212 ntBASIC5.48□□□□□ -1.53
NFKB1P19838 AC006254.3-201ENST00000603353 884 ntBASIC5.48□□□□□ -1.53
NFKB1P19838 AL451044.1-201ENST00000604867 238 ntBASIC5.48□□□□□ -1.53
NFKB1P19838 AL691477.1-201ENST00000624398 162 ntBASIC5.48□□□□□ -1.53
NFKB1P19838 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.48□□□□□ -1.53
NFKB1P19838 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NFKB1P19838 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NFKB1P19838 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NFKB1P19838 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NFKB1P19838 AC233263.6-201ENST00000631132 1963 ntBASIC5.47□□□□□ -1.53
NFKB1P19838 SMG1P7-201ENST00000565246 2704 ntBASIC5.47□□□□□ -1.53
NFKB1P19838 AC133552.1-201ENST00000569988 4007 ntBASIC5.47□□□□□ -1.53
NFKB1P19838 AL078621.3-201ENST00000623707 2042 ntBASIC5.47□□□□□ -1.53
NFKB1P19838 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
NFKB1P19838 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NFKB1P19838 RNU6-715P-201ENST00000365204 103 ntBASIC5.47□□□□□ -1.53
NFKB1P19838 SNORA5.1-201ENST00000384275 131 ntBASIC5.47□□□□□ -1.53
NFKB1P19838 RNU6-754P-201ENST00000391166 107 ntBASIC5.47□□□□□ -1.53
NFKB1P19838 SNORA17A-201ENST00000391185 133 ntBASIC5.47□□□□□ -1.53
NFKB1P19838 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 221.1 ms