Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 SNORA51.4-201ENST00000364993 124 ntBASIC3.09□□□□□ -1.91
HDAC3O15379 RNU6-413P-201ENST00000384115 107 ntBASIC3.09□□□□□ -1.91
HDAC3O15379 MIR217-201ENST00000384817 110 ntBASIC3.09□□□□□ -1.91
HDAC3O15379 SNORD65.1-201ENST00000390889 71 ntBASIC3.09□□□□□ -1.91
HDAC3O15379 GSTA8P-201ENST00000404253 637 ntBASIC3.09□□□□□ -1.91
HDAC3O15379 AL590084.1-201ENST00000407885 387 ntBASIC3.09□□□□□ -1.91
HDAC3O15379 SNORA11-201ENST00000408789 128 ntBASIC3.09□□□□□ -1.91
HDAC3O15379 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.09□□□□□ -1.91
HDAC3O15379 RNU2-65P-201ENST00000410162 185 ntBASIC3.09□□□□□ -1.91
HDAC3O15379 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.09□□□□□ -1.91
HDAC3O15379 SYF2P2-201ENST00000417620 583 ntBASIC3.09□□□□□ -1.91
HDAC3O15379 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.09□□□□□ -1.91
HDAC3O15379 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.09□□□□□ -1.91
HDAC3O15379 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.09□□□□□ -1.91
HDAC3O15379 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.09□□□□□ -1.91
HDAC3O15379 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.09□□□□□ -1.91
HDAC3O15379 YWHAZP7-201ENST00000436906 631 ntBASIC3.09□□□□□ -1.91
HDAC3O15379 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.09□□□□□ -1.91
HDAC3O15379 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.09□□□□□ -1.91
HDAC3O15379 RPL21P23-201ENST00000446654 460 ntBASIC3.09□□□□□ -1.91
HDAC3O15379 GAPDHP27-201ENST00000447427 1020 ntBASIC3.09□□□□□ -1.91
HDAC3O15379 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
HDAC3O15379 ELOCP23-201ENST00000452014 332 ntBASIC3.09□□□□□ -1.91
HDAC3O15379 AL445669.2-201ENST00000454425 421 ntBASIC3.09□□□□□ -1.91
HDAC3O15379 SNORA84-201ENST00000459229 133 ntBASIC3.09□□□□□ -1.91
HDAC3O15379 AC011979.1-201ENST00000472300 483 ntBASIC3.09□□□□□ -1.91
HDAC3O15379 AC104689.1-201ENST00000473356 768 ntBASIC3.09□□□□□ -1.91
HDAC3O15379 ACTR3P3-201ENST00000480448 893 ntBASIC3.09□□□□□ -1.91
HDAC3O15379 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.09□□□□□ -1.91
HDAC3O15379 AC011352.3-201ENST00000505162 593 ntBASIC3.09□□□□□ -1.91
HDAC3O15379 AC008885.2-201ENST00000509506 930 ntBASIC3.09□□□□□ -1.91
HDAC3O15379 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.09□□□□□ -1.91
HDAC3O15379 AC008837.2-201ENST00000513076 418 ntBASIC3.09□□□□□ -1.91
HDAC3O15379 RNU6-202P-201ENST00000515998 96 ntBASIC3.09□□□□□ -1.91
HDAC3O15379 MTND2P26-201ENST00000528255 1029 ntBASIC3.09□□□□□ -1.91
HDAC3O15379 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
HDAC3O15379 AC007536.1-201ENST00000533382 349 ntBASIC3.09□□□□□ -1.91
HDAC3O15379 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.09□□□□□ -1.91
HDAC3O15379 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.09□□□□□ -1.91
HDAC3O15379 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.09□□□□□ -1.91
HDAC3O15379 AC145350.1-201ENST00000567426 208 ntBASIC3.09□□□□□ -1.91
HDAC3O15379 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.09□□□□□ -1.91
HDAC3O15379 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.09□□□□□ -1.91
HDAC3O15379 MIR4276-201ENST00000584832 70 ntBASIC3.09□□□□□ -1.91
HDAC3O15379 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.09□□□□□ -1.91
HDAC3O15379 AL162713.1-201ENST00000604480 262 ntBASIC3.09□□□□□ -1.91
HDAC3O15379 AC097065.2-201ENST00000608159 533 ntBASIC3.09□□□□□ -1.91
HDAC3O15379 uc_338.25-201ENST00000613756 156 ntBASIC3.09□□□□□ -1.91
HDAC3O15379 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HDAC3O15379 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.09□□□□□ -1.91
HDAC3O15379 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HDAC3O15379 AC039056.2-201ENST00000622261 511 ntBASIC3.09□□□□□ -1.91
HDAC3O15379 AC243312.2-201ENST00000623340 601 ntBASIC3.09□□□□□ -1.91
HDAC3O15379 AC017037.3-201ENST00000625016 472 ntBASIC3.09□□□□□ -1.91
HDAC3O15379 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HDAC3O15379 MAPK10-322ENST00000641485 4530 ntBASIC3.09□□□□□ -1.92
HDAC3O15379 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HDAC3O15379 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HDAC3O15379 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.08□□□□□ -1.92
HDAC3O15379 AC016716.1-201ENST00000265882 708 ntBASIC3.08□□□□□ -1.92
HDAC3O15379 AL512646.1-201ENST00000269395 1077 ntBASIC3.08□□□□□ -1.92
HDAC3O15379 RPL23AP57-201ENST00000332361 466 ntBASIC3.08□□□□□ -1.92
HDAC3O15379 NACA3P-201ENST00000359690 648 ntBASIC3.08□□□□□ -1.92
HDAC3O15379 RNU6-839P-201ENST00000363347 108 ntBASIC3.08□□□□□ -1.92
HDAC3O15379 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HDAC3O15379 SNORA5A-201ENST00000384111 134 ntBASIC3.08□□□□□ -1.92
HDAC3O15379 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.08□□□□□ -1.92
HDAC3O15379 BX842559.1-201ENST00000419615 532 ntBASIC3.08□□□□□ -1.92
HDAC3O15379 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.08□□□□□ -1.92
HDAC3O15379 AL139281.1-201ENST00000422120 335 ntBASIC3.08□□□□□ -1.92
HDAC3O15379 RPL7P44-201ENST00000424827 742 ntBASIC3.08□□□□□ -1.92
HDAC3O15379 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.08□□□□□ -1.92
HDAC3O15379 AC018644.1-201ENST00000429934 551 ntBASIC3.08□□□□□ -1.92
HDAC3O15379 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.08□□□□□ -1.92
HDAC3O15379 RPL21P2-201ENST00000440049 481 ntBASIC3.08□□□□□ -1.92
HDAC3O15379 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.08□□□□□ -1.92
HDAC3O15379 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.08□□□□□ -1.92
HDAC3O15379 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.08□□□□□ -1.92
HDAC3O15379 AL590639.1-201ENST00000456484 337 ntBASIC3.08□□□□□ -1.92
HDAC3O15379 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.08□□□□□ -1.92
HDAC3O15379 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HDAC3O15379 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.08□□□□□ -1.92
HDAC3O15379 DYNLL1P6-201ENST00000503440 264 ntBASIC3.08□□□□□ -1.92
HDAC3O15379 ARL4AP2-201ENST00000507378 601 ntBASIC3.08□□□□□ -1.92
HDAC3O15379 AC111000.2-201ENST00000507775 550 ntBASIC3.08□□□□□ -1.92
HDAC3O15379 KLHL2P1-201ENST00000508691 521 ntBASIC3.08□□□□□ -1.92
HDAC3O15379 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.08□□□□□ -1.92
HDAC3O15379 RNU6-885P-201ENST00000516607 104 ntBASIC3.08□□□□□ -1.92
HDAC3O15379 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.08□□□□□ -1.92
HDAC3O15379 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.08□□□□□ -1.92
HDAC3O15379 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.08□□□□□ -1.92
HDAC3O15379 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.08□□□□□ -1.92
HDAC3O15379 ZNF321P-202ENST00000550843 495 ntBASIC3.08□□□□□ -1.92
HDAC3O15379 HIGD1AP1-201ENST00000550979 275 ntBASIC3.08□□□□□ -1.92
HDAC3O15379 MRPS36P5-201ENST00000551909 298 ntBASIC3.08□□□□□ -1.92
HDAC3O15379 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.08□□□□□ -1.92
HDAC3O15379 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.08□□□□□ -1.92
HDAC3O15379 AC009094.1-201ENST00000564443 426 ntBASIC3.08□□□□□ -1.92
HDAC3O15379 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.08□□□□□ -1.92
HDAC3O15379 MIR2682-201ENST00000580305 110 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 224 ms