Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 RPS24P7-201ENST00000416921 246 ntBASIC3.11□□□□□ -1.91
HDAC3O15379 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.11□□□□□ -1.91
HDAC3O15379 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.11□□□□□ -1.91
HDAC3O15379 RPF2P1-201ENST00000424137 906 ntBASIC3.11□□□□□ -1.91
HDAC3O15379 AC233728.2-201ENST00000425348 757 ntBASIC3.11□□□□□ -1.91
HDAC3O15379 AC073063.1-201ENST00000434352 607 ntBASIC3.11□□□□□ -1.91
HDAC3O15379 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HDAC3O15379 AC244505.4-201ENST00000434905 287 ntBASIC3.11□□□□□ -1.91
HDAC3O15379 SNRPEP4-201ENST00000435815 279 ntBASIC3.11□□□□□ -1.91
HDAC3O15379 AC092641.1-201ENST00000440229 772 ntBASIC3.11□□□□□ -1.91
HDAC3O15379 RPL23AP76-201ENST00000441860 458 ntBASIC3.11□□□□□ -1.91
HDAC3O15379 SSXP5-201ENST00000443473 287 ntBASIC3.11□□□□□ -1.91
HDAC3O15379 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.11□□□□□ -1.91
HDAC3O15379 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.11□□□□□ -1.91
HDAC3O15379 RPL21P13-201ENST00000488305 481 ntBASIC3.11□□□□□ -1.91
HDAC3O15379 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.11□□□□□ -1.91
HDAC3O15379 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HDAC3O15379 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.11□□□□□ -1.91
HDAC3O15379 AC109471.1-201ENST00000511631 612 ntBASIC3.11□□□□□ -1.91
HDAC3O15379 SAP18P1-201ENST00000512058 390 ntBASIC3.11□□□□□ -1.91
HDAC3O15379 RNU1-95P-201ENST00000516357 160 ntBASIC3.11□□□□□ -1.91
HDAC3O15379 RNU1-128P-201ENST00000516704 160 ntBASIC3.11□□□□□ -1.91
HDAC3O15379 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.11□□□□□ -1.91
HDAC3O15379 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.11□□□□□ -1.91
HDAC3O15379 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.11□□□□□ -1.91
HDAC3O15379 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.11□□□□□ -1.91
HDAC3O15379 AC055876.1-202ENST00000567053 138 ntBASIC3.11□□□□□ -1.91
HDAC3O15379 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.11□□□□□ -1.91
HDAC3O15379 AP001029.3-201ENST00000588063 596 ntBASIC3.11□□□□□ -1.91
HDAC3O15379 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.11□□□□□ -1.91
HDAC3O15379 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.11□□□□□ -1.91
HDAC3O15379 DUXAP4-201ENST00000603046 613 ntBASIC3.11□□□□□ -1.91
HDAC3O15379 AL353778.1-201ENST00000603149 408 ntBASIC3.11□□□□□ -1.91
HDAC3O15379 AC092954.1-201ENST00000609121 445 ntBASIC3.11□□□□□ -1.91
HDAC3O15379 AL121772.2-201ENST00000614331 297 ntBASIC3.11□□□□□ -1.91
HDAC3O15379 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HDAC3O15379 AC109454.4-201ENST00000623411 649 ntBASIC3.11□□□□□ -1.91
HDAC3O15379 AP003485.2-201ENST00000623636 610 ntBASIC3.11□□□□□ -1.91
HDAC3O15379 AP003122.6-201ENST00000623831 495 ntBASIC3.11□□□□□ -1.91
HDAC3O15379 AC009039.2-201ENST00000624524 529 ntBASIC3.11□□□□□ -1.91
HDAC3O15379 AC087821.2-201ENST00000637086 450 ntBASIC3.11□□□□□ -1.91
HDAC3O15379 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.11□□□□□ -1.91
HDAC3O15379 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HDAC3O15379 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
HDAC3O15379 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
HDAC3O15379 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HDAC3O15379 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HDAC3O15379 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HDAC3O15379 Y_RNA.408-201ENST00000383987 102 ntBASIC3.1□□□□□ -1.91
HDAC3O15379 RNU6-83P-201ENST00000384568 112 ntBASIC3.1□□□□□ -1.91
HDAC3O15379 AL121972.1-201ENST00000402023 252 ntBASIC3.1□□□□□ -1.91
HDAC3O15379 BTBD10P2-201ENST00000404779 676 ntBASIC3.1□□□□□ -1.91
HDAC3O15379 AL008987.1-201ENST00000415528 237 ntBASIC3.1□□□□□ -1.91
HDAC3O15379 AC010099.3-201ENST00000423896 409 ntBASIC3.1□□□□□ -1.91
HDAC3O15379 MTCO1P3-201ENST00000429327 192 ntBASIC3.1□□□□□ -1.91
HDAC3O15379 AC007389.2-201ENST00000434630 306 ntBASIC3.1□□□□□ -1.91
HDAC3O15379 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.1□□□□□ -1.91
HDAC3O15379 GTF2IP7-202ENST00000436677 309 ntBASIC3.1□□□□□ -1.91
HDAC3O15379 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.1□□□□□ -1.91
HDAC3O15379 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.1□□□□□ -1.91
HDAC3O15379 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.1□□□□□ -1.91
HDAC3O15379 AC106707.2-201ENST00000484182 374 ntBASIC3.1□□□□□ -1.91
HDAC3O15379 RPL7P38-201ENST00000488396 739 ntBASIC3.1□□□□□ -1.91
HDAC3O15379 AC113347.3-201ENST00000509113 148 ntBASIC3.1□□□□□ -1.91
HDAC3O15379 RN7SKP43-201ENST00000516173 320 ntBASIC3.1□□□□□ -1.91
HDAC3O15379 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.1□□□□□ -1.91
HDAC3O15379 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.1□□□□□ -1.91
HDAC3O15379 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.1□□□□□ -1.91
HDAC3O15379 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.1□□□□□ -1.91
HDAC3O15379 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.1□□□□□ -1.91
HDAC3O15379 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.1□□□□□ -1.91
HDAC3O15379 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.1□□□□□ -1.91
HDAC3O15379 AL442163.2-201ENST00000553912 710 ntBASIC3.1□□□□□ -1.91
HDAC3O15379 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.1□□□□□ -1.91
HDAC3O15379 BPTFP1-201ENST00000579209 492 ntBASIC3.1□□□□□ -1.91
HDAC3O15379 MIR1254-2-201ENST00000579553 63 ntBASIC3.1□□□□□ -1.91
HDAC3O15379 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.1□□□□□ -1.91
HDAC3O15379 AC061975.8-201ENST00000587058 721 ntBASIC3.1□□□□□ -1.91
HDAC3O15379 AC004223.2-201ENST00000590309 544 ntBASIC3.1□□□□□ -1.91
HDAC3O15379 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.1□□□□□ -1.91
HDAC3O15379 AC008687.2-201ENST00000597865 520 ntBASIC3.1□□□□□ -1.91
HDAC3O15379 NIFKP6-201ENST00000598115 845 ntBASIC3.1□□□□□ -1.91
HDAC3O15379 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.1□□□□□ -1.91
HDAC3O15379 AC025588.2-201ENST00000604851 466 ntBASIC3.1□□□□□ -1.91
HDAC3O15379 AL627309.6-201ENST00000606857 840 ntBASIC3.1□□□□□ -1.91
HDAC3O15379 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.1□□□□□ -1.91
HDAC3O15379 AC006111.3-201ENST00000622137 383 ntBASIC3.1□□□□□ -1.91
HDAC3O15379 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.1□□□□□ -1.91
HDAC3O15379 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HDAC3O15379 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HDAC3O15379 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HDAC3O15379 SAGE4P-201ENST00000442271 3381 ntBASIC3.1□□□□□ -1.91
HDAC3O15379 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.1□□□□□ -1.91
HDAC3O15379 ZNF285B-201ENST00000561698 1767 ntBASIC3.1□□□□□ -1.91
HDAC3O15379 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
HDAC3O15379 AC046144.1-201ENST00000478559 1853 ntBASIC3.09□□□□□ -1.91
HDAC3O15379 PABPC1P7-201ENST00000413177 1513 ntBASIC3.09□□□□□ -1.91
HDAC3O15379 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HDAC3O15379 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.09□□□□□ -1.91
HDAC3O15379 AL353743.1-202ENST00000431724 1695 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 163.6 ms