Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 MTATP6P26-201ENST00000445926 662 ntBASIC3.13□□□□□ -1.91
HDAC3O15379 PTENP1-201ENST00000447117 1215 ntBASIC3.13□□□□□ -1.91
HDAC3O15379 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.13□□□□□ -1.91
HDAC3O15379 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.13□□□□□ -1.91
HDAC3O15379 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HDAC3O15379 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.13□□□□□ -1.91
HDAC3O15379 AC104619.4-201ENST00000510773 249 ntBASIC3.13□□□□□ -1.91
HDAC3O15379 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.13□□□□□ -1.91
HDAC3O15379 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.13□□□□□ -1.91
HDAC3O15379 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.13□□□□□ -1.91
HDAC3O15379 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.13□□□□□ -1.91
HDAC3O15379 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.13□□□□□ -1.91
HDAC3O15379 COX6B1P6-201ENST00000522347 255 ntBASIC3.13□□□□□ -1.91
HDAC3O15379 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.13□□□□□ -1.91
HDAC3O15379 MTCO2P15-201ENST00000532655 656 ntBASIC3.13□□□□□ -1.91
HDAC3O15379 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.13□□□□□ -1.91
HDAC3O15379 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.13□□□□□ -1.91
HDAC3O15379 AC004217.3-201ENST00000551552 878 ntBASIC3.13□□□□□ -1.91
HDAC3O15379 GTF2IP22-201ENST00000554443 182 ntBASIC3.13□□□□□ -1.91
HDAC3O15379 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.13□□□□□ -1.91
HDAC3O15379 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
HDAC3O15379 AC090312.2-201ENST00000582687 378 ntBASIC3.13□□□□□ -1.91
HDAC3O15379 SNORD84-203ENST00000584275 78 ntBASIC3.13□□□□□ -1.91
HDAC3O15379 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.13□□□□□ -1.91
HDAC3O15379 AL354976.1-201ENST00000613843 387 ntBASIC3.13□□□□□ -1.91
HDAC3O15379 AL157817.1-201ENST00000614264 790 ntBASIC3.13□□□□□ -1.91
HDAC3O15379 AC090897.3-201ENST00000636973 1157 ntBASIC3.13□□□□□ -1.91
HDAC3O15379 MFSD8-245ENST00000641743 948 ntBASIC3.13□□□□□ -1.91
HDAC3O15379 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
HDAC3O15379 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
HDAC3O15379 MTND5P19-201ENST00000424872 1794 ntBASIC3.12□□□□□ -1.91
HDAC3O15379 AP005901.5-201ENST00000545779 1796 ntBASIC3.12□□□□□ -1.91
HDAC3O15379 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
HDAC3O15379 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HDAC3O15379 SGO1P1-201ENST00000603525 1447 ntBASIC3.12□□□□□ -1.91
HDAC3O15379 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.12□□□□□ -1.91
HDAC3O15379 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HDAC3O15379 ZNF876P-202ENST00000398732 1485 ntBASIC3.12□□□□□ -1.91
HDAC3O15379 RNU4-92P-201ENST00000363783 136 ntBASIC3.12□□□□□ -1.91
HDAC3O15379 U8.9-201ENST00000365667 134 ntBASIC3.12□□□□□ -1.91
HDAC3O15379 AL359837.1-201ENST00000381357 287 ntBASIC3.12□□□□□ -1.91
HDAC3O15379 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
HDAC3O15379 MTCO2P31-201ENST00000402702 684 ntBASIC3.12□□□□□ -1.91
HDAC3O15379 AL591034.1-201ENST00000407447 340 ntBASIC3.12□□□□□ -1.91
HDAC3O15379 OR51A3P-201ENST00000413596 924 ntBASIC3.12□□□□□ -1.91
HDAC3O15379 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.12□□□□□ -1.91
HDAC3O15379 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.12□□□□□ -1.91
HDAC3O15379 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.12□□□□□ -1.91
HDAC3O15379 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.12□□□□□ -1.91
HDAC3O15379 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.12□□□□□ -1.91
HDAC3O15379 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.12□□□□□ -1.91
HDAC3O15379 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.12□□□□□ -1.91
HDAC3O15379 FGF7P5-201ENST00000441829 291 ntBASIC3.12□□□□□ -1.91
HDAC3O15379 RPS12P18-201ENST00000442381 270 ntBASIC3.12□□□□□ -1.91
HDAC3O15379 AC079776.3-201ENST00000450665 370 ntBASIC3.12□□□□□ -1.91
HDAC3O15379 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.12□□□□□ -1.91
HDAC3O15379 GAPDHP39-201ENST00000481866 979 ntBASIC3.12□□□□□ -1.91
HDAC3O15379 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.12□□□□□ -1.91
HDAC3O15379 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.12□□□□□ -1.91
HDAC3O15379 AC118282.2-201ENST00000508739 374 ntBASIC3.12□□□□□ -1.91
HDAC3O15379 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.12□□□□□ -1.91
HDAC3O15379 AP004371.1-201ENST00000525240 214 ntBASIC3.12□□□□□ -1.91
HDAC3O15379 UBTFL10-201ENST00000528532 562 ntBASIC3.12□□□□□ -1.91
HDAC3O15379 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.12□□□□□ -1.91
HDAC3O15379 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.12□□□□□ -1.91
HDAC3O15379 AADACP1-206ENST00000561502 1193 ntBASIC3.12□□□□□ -1.91
HDAC3O15379 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.12□□□□□ -1.91
HDAC3O15379 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HDAC3O15379 MTCO3P24-201ENST00000572729 782 ntBASIC3.12□□□□□ -1.91
HDAC3O15379 AP001269.3-201ENST00000588718 329 ntBASIC3.12□□□□□ -1.91
HDAC3O15379 VN1R78P-201ENST00000597393 564 ntBASIC3.12□□□□□ -1.91
HDAC3O15379 AL139344.1-201ENST00000605228 195 ntBASIC3.12□□□□□ -1.91
HDAC3O15379 U3.45-201ENST00000607547 219 ntBASIC3.12□□□□□ -1.91
HDAC3O15379 AC007349.4-201ENST00000608114 532 ntBASIC3.12□□□□□ -1.91
HDAC3O15379 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.12□□□□□ -1.91
HDAC3O15379 AP004247.3-201ENST00000608682 624 ntBASIC3.12□□□□□ -1.91
HDAC3O15379 AC107075.1-201ENST00000613695 314 ntBASIC3.12□□□□□ -1.91
HDAC3O15379 AC231759.1-201ENST00000616455 597 ntBASIC3.12□□□□□ -1.91
HDAC3O15379 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.12□□□□□ -1.91
HDAC3O15379 OR1S1-201ENST00000624470 978 ntBASIC3.12□□□□□ -1.91
HDAC3O15379 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.12□□□□□ -1.91
HDAC3O15379 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.12□□□□□ -1.91
HDAC3O15379 AC009093.8-201ENST00000641769 292 ntBASIC3.12□□□□□ -1.91
HDAC3O15379 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HDAC3O15379 AC008264.2-201ENST00000610193 3731 ntBASIC3.12□□□□□ -1.91
HDAC3O15379 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.12□□□□□ -1.91
HDAC3O15379 AC093010.3-201ENST00000570269 15214 ntBASIC3.11□□□□□ -1.91
HDAC3O15379 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HDAC3O15379 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HDAC3O15379 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HDAC3O15379 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HDAC3O15379 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
HDAC3O15379 RNA5SP124-201ENST00000362739 110 ntBASIC3.11□□□□□ -1.91
HDAC3O15379 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
HDAC3O15379 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HDAC3O15379 RNU6ATAC-201ENST00000408749 126 ntBASIC3.11□□□□□ -1.91
HDAC3O15379 RNU2-21P-201ENST00000410368 188 ntBASIC3.11□□□□□ -1.91
HDAC3O15379 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.11□□□□□ -1.91
HDAC3O15379 AC109780.2-201ENST00000413467 845 ntBASIC3.11□□□□□ -1.91
HDAC3O15379 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 215.3 ms