Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mre11Q61216 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mre11Q61216 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mre11Q61216 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Mre11Q61216 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC19.67■□□□□ 0.74
Mre11Q61216 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Mre11Q61216 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mre11Q61216 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Mre11Q61216 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mre11Q61216 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Mre11Q61216 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.67■□□□□ 0.74
Mre11Q61216 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mre11Q61216 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mre11Q61216 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Mre11Q61216 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mre11Q61216 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mre11Q61216 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mre11Q61216 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mre11Q61216 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Mre11Q61216 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Mre11Q61216 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Mre11Q61216 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mre11Q61216 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mre11Q61216 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC19.66■□□□□ 0.74
Mre11Q61216 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Mre11Q61216 Gm26571-201ENSMUST00000181399 666 ntBASIC19.66■□□□□ 0.74
Mre11Q61216 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.66■□□□□ 0.74
Mre11Q61216 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mre11Q61216 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mre11Q61216 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mre11Q61216 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Mre11Q61216 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Mre11Q61216 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Mre11Q61216 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mre11Q61216 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.65■□□□□ 0.74
Mre11Q61216 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Mre11Q61216 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mre11Q61216 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Mre11Q61216 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.65■□□□□ 0.74
Mre11Q61216 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mre11Q61216 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mre11Q61216 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mre11Q61216 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Mre11Q61216 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Mre11Q61216 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mre11Q61216 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mre11Q61216 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mre11Q61216 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Mre11Q61216 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Mre11Q61216 Gm43352-201ENSMUST00000196419 3065 ntBASIC19.65■□□□□ 0.74
Mre11Q61216 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mre11Q61216 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC19.64■□□□□ 0.74
Mre11Q61216 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Mre11Q61216 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
Mre11Q61216 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.64■□□□□ 0.73
Mre11Q61216 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mre11Q61216 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.64■□□□□ 0.73
Mre11Q61216 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Mre11Q61216 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mre11Q61216 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Mre11Q61216 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mre11Q61216 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mre11Q61216 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Mre11Q61216 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mre11Q61216 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.64■□□□□ 0.73
Mre11Q61216 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mre11Q61216 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mre11Q61216 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mre11Q61216 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Mre11Q61216 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mre11Q61216 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mre11Q61216 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mre11Q61216 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mre11Q61216 Gm37736-201ENSMUST00000193564 2802 ntBASIC19.63■□□□□ 0.73
Mre11Q61216 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mre11Q61216 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mre11Q61216 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mre11Q61216 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mre11Q61216 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mre11Q61216 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mre11Q61216 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mre11Q61216 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mre11Q61216 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Mre11Q61216 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Mre11Q61216 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Mre11Q61216 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mre11Q61216 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mre11Q61216 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.63■□□□□ 0.73
Mre11Q61216 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mre11Q61216 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mre11Q61216 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Mre11Q61216 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mre11Q61216 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mre11Q61216 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC19.62■□□□□ 0.73
Mre11Q61216 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mre11Q61216 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Mre11Q61216 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mre11Q61216 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.62■□□□□ 0.73
Mre11Q61216 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Mre11Q61216 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 1469.7 ms