Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC108467.2-201ENST00000617640 1597 ntBASIC5.22□□□□□ -1.57
EPHB3P54753 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
EPHB3P54753 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
EPHB3P54753 AC066616.2-201ENST00000559334 1481 ntBASIC5.22□□□□□ -1.57
EPHB3P54753 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
EPHB3P54753 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
EPHB3P54753 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC5.22□□□□□ -1.57
EPHB3P54753 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.22□□□□□ -1.57
EPHB3P54753 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.22□□□□□ -1.57
EPHB3P54753 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.22□□□□□ -1.57
EPHB3P54753 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
EPHB3P54753 NPM1P18-201ENST00000434232 732 ntBASIC5.22□□□□□ -1.57
EPHB3P54753 AC093414.1-201ENST00000434712 514 ntBASIC5.22□□□□□ -1.57
EPHB3P54753 AC236972.2-201ENST00000434979 310 ntBASIC5.22□□□□□ -1.57
EPHB3P54753 SNRPEP7-201ENST00000438350 220 ntBASIC5.22□□□□□ -1.57
EPHB3P54753 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.22□□□□□ -1.57
EPHB3P54753 TPT1P13-201ENST00000449760 499 ntBASIC5.22□□□□□ -1.57
EPHB3P54753 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.22□□□□□ -1.57
EPHB3P54753 HMGB1P4-201ENST00000455362 567 ntBASIC5.22□□□□□ -1.57
EPHB3P54753 RNU6-261P-201ENST00000459506 102 ntBASIC5.22□□□□□ -1.57
EPHB3P54753 IGKV1-32-201ENST00000519290 311 ntBASIC5.22□□□□□ -1.57
EPHB3P54753 ELOCP31-201ENST00000540463 467 ntBASIC5.22□□□□□ -1.57
EPHB3P54753 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC5.22□□□□□ -1.57
EPHB3P54753 AL512782.1-201ENST00000603093 364 ntBASIC5.22□□□□□ -1.57
EPHB3P54753 AC136443.5-201ENST00000603741 370 ntBASIC5.22□□□□□ -1.57
EPHB3P54753 AL391358.1-201ENST00000605342 190 ntBASIC5.22□□□□□ -1.57
EPHB3P54753 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.22□□□□□ -1.57
EPHB3P54753 MIR98-201ENST00000606724 119 ntBASIC5.22□□□□□ -1.57
EPHB3P54753 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.22□□□□□ -1.57
EPHB3P54753 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.22□□□□□ -1.57
EPHB3P54753 uc_338.18-201ENST00000615451 175 ntBASIC5.22□□□□□ -1.57
EPHB3P54753 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.22□□□□□ -1.57
EPHB3P54753 AC007792.1-201ENST00000623023 402 ntBASIC5.22□□□□□ -1.57
EPHB3P54753 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.22□□□□□ -1.57
EPHB3P54753 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
EPHB3P54753 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.22□□□□□ -1.57
EPHB3P54753 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
EPHB3P54753 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
EPHB3P54753 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
EPHB3P54753 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.22□□□□□ -1.57
EPHB3P54753 MAPK10-338ENST00000641647 3362 ntBASIC5.22□□□□□ -1.57
EPHB3P54753 AC093775.1-201ENST00000624154 1868 ntBASIC5.22□□□□□ -1.57
EPHB3P54753 AL450345.1-202ENST00000605741 3881 ntBASIC5.22□□□□□ -1.57
EPHB3P54753 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.21□□□□□ -1.57
EPHB3P54753 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.57
EPHB3P54753 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.21□□□□□ -1.57
EPHB3P54753 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
EPHB3P54753 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.21□□□□□ -1.57
EPHB3P54753 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.21□□□□□ -1.57
EPHB3P54753 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.21□□□□□ -1.58
EPHB3P54753 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
EPHB3P54753 RNU6-777P-201ENST00000364265 104 ntBASIC5.21□□□□□ -1.58
EPHB3P54753 SNORD42.2-201ENST00000365570 69 ntBASIC5.21□□□□□ -1.58
EPHB3P54753 RNU6-74P-201ENST00000384235 107 ntBASIC5.21□□□□□ -1.58
EPHB3P54753 AC013442.1-201ENST00000397347 228 ntBASIC5.21□□□□□ -1.58
EPHB3P54753 RPS16P5-201ENST00000406501 404 ntBASIC5.21□□□□□ -1.58
EPHB3P54753 RN7SKP222-201ENST00000410651 315 ntBASIC5.21□□□□□ -1.58
EPHB3P54753 GPS2P1-201ENST00000411761 986 ntBASIC5.21□□□□□ -1.58
EPHB3P54753 MRPL50P2-201ENST00000416821 482 ntBASIC5.21□□□□□ -1.58
EPHB3P54753 AL807761.1-201ENST00000417622 171 ntBASIC5.21□□□□□ -1.58
EPHB3P54753 MTATP6P18-201ENST00000417994 673 ntBASIC5.21□□□□□ -1.58
EPHB3P54753 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.21□□□□□ -1.58
EPHB3P54753 ELOCP4-201ENST00000420090 333 ntBASIC5.21□□□□□ -1.58
EPHB3P54753 RPEP2-201ENST00000432149 701 ntBASIC5.21□□□□□ -1.58
EPHB3P54753 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.21□□□□□ -1.58
EPHB3P54753 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.21□□□□□ -1.58
EPHB3P54753 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.21□□□□□ -1.58
EPHB3P54753 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.21□□□□□ -1.58
EPHB3P54753 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.21□□□□□ -1.58
EPHB3P54753 RPS27AP17-201ENST00000463344 455 ntBASIC5.21□□□□□ -1.58
EPHB3P54753 AC006967.1-201ENST00000467608 589 ntBASIC5.21□□□□□ -1.58
EPHB3P54753 AC008897.1-201ENST00000494006 347 ntBASIC5.21□□□□□ -1.58
EPHB3P54753 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.21□□□□□ -1.58
EPHB3P54753 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
EPHB3P54753 AC087241.2-201ENST00000535801 324 ntBASIC5.21□□□□□ -1.58
EPHB3P54753 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.21□□□□□ -1.58
EPHB3P54753 AC022884.2-201ENST00000578535 580 ntBASIC5.21□□□□□ -1.58
EPHB3P54753 AC006363.1-201ENST00000603806 463 ntBASIC5.21□□□□□ -1.58
EPHB3P54753 AL161734.1-201ENST00000609720 557 ntBASIC5.21□□□□□ -1.58
EPHB3P54753 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
EPHB3P54753 AC009248.2-201ENST00000619826 254 ntBASIC5.21□□□□□ -1.58
EPHB3P54753 AC068831.8-201ENST00000620171 435 ntBASIC5.21□□□□□ -1.58
EPHB3P54753 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.21□□□□□ -1.58
EPHB3P54753 AC100810.6-201ENST00000638068 285 ntBASIC5.21□□□□□ -1.58
EPHB3P54753 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
EPHB3P54753 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
EPHB3P54753 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.21□□□□□ -1.58
EPHB3P54753 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
EPHB3P54753 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
EPHB3P54753 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
EPHB3P54753 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
EPHB3P54753 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
EPHB3P54753 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
EPHB3P54753 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
EPHB3P54753 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
EPHB3P54753 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
EPHB3P54753 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
EPHB3P54753 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
EPHB3P54753 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
EPHB3P54753 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 222.8 ms