Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smco4Q9JIS3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smco4Q9JIS3 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smco4Q9JIS3 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smco4Q9JIS3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smco4Q9JIS3 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smco4Q9JIS3 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smco4Q9JIS3 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smco4Q9JIS3 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Smco4Q9JIS3 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smco4Q9JIS3 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smco4Q9JIS3 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Smco4Q9JIS3 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smco4Q9JIS3 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smco4Q9JIS3 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smco4Q9JIS3 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smco4Q9JIS3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smco4Q9JIS3 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smco4Q9JIS3 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Smco4Q9JIS3 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smco4Q9JIS3 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Smco4Q9JIS3 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smco4Q9JIS3 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smco4Q9JIS3 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Smco4Q9JIS3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smco4Q9JIS3 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smco4Q9JIS3 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smco4Q9JIS3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smco4Q9JIS3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC13.25□□□□□ -0.29
Smco4Q9JIS3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Smco4Q9JIS3 Gm5576-201ENSMUST00000075809 1236 ntBASIC13.25□□□□□ -0.29
Smco4Q9JIS3 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smco4Q9JIS3 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smco4Q9JIS3 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smco4Q9JIS3 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smco4Q9JIS3 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
Smco4Q9JIS3 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smco4Q9JIS3 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smco4Q9JIS3 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smco4Q9JIS3 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smco4Q9JIS3 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smco4Q9JIS3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smco4Q9JIS3 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smco4Q9JIS3 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smco4Q9JIS3 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smco4Q9JIS3 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smco4Q9JIS3 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smco4Q9JIS3 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smco4Q9JIS3 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smco4Q9JIS3 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smco4Q9JIS3 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Smco4Q9JIS3 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smco4Q9JIS3 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smco4Q9JIS3 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smco4Q9JIS3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smco4Q9JIS3 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smco4Q9JIS3 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smco4Q9JIS3 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smco4Q9JIS3 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smco4Q9JIS3 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Smco4Q9JIS3 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
Smco4Q9JIS3 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smco4Q9JIS3 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smco4Q9JIS3 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smco4Q9JIS3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smco4Q9JIS3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC13.24□□□□□ -0.29
Smco4Q9JIS3 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smco4Q9JIS3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smco4Q9JIS3 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smco4Q9JIS3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smco4Q9JIS3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smco4Q9JIS3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Smco4Q9JIS3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smco4Q9JIS3 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smco4Q9JIS3 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smco4Q9JIS3 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smco4Q9JIS3 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Smco4Q9JIS3 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smco4Q9JIS3 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smco4Q9JIS3 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smco4Q9JIS3 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smco4Q9JIS3 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smco4Q9JIS3 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smco4Q9JIS3 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Smco4Q9JIS3 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Smco4Q9JIS3 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Smco4Q9JIS3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smco4Q9JIS3 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smco4Q9JIS3 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smco4Q9JIS3 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Smco4Q9JIS3 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smco4Q9JIS3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC13.23□□□□□ -0.29
Smco4Q9JIS3 Gm27801-201ENSMUST00000184174 223 ntBASIC13.23□□□□□ -0.29
Smco4Q9JIS3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC13.23□□□□□ -0.29
Smco4Q9JIS3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC13.23□□□□□ -0.29
Smco4Q9JIS3 CT030146.1-201ENSMUST00000220919 217 ntBASIC13.23□□□□□ -0.29
Smco4Q9JIS3 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smco4Q9JIS3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smco4Q9JIS3 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smco4Q9JIS3 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms