Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43aQ3TL54 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43aQ3TL54 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43aQ3TL54 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43aQ3TL54 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43aQ3TL54 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43aQ3TL54 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.43■□□□□ 0.38
Trim43aQ3TL54 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43aQ3TL54 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43aQ3TL54 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43aQ3TL54 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43aQ3TL54 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43aQ3TL54 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43aQ3TL54 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trim43aQ3TL54 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43aQ3TL54 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43aQ3TL54 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43aQ3TL54 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.42■□□□□ 0.38
Trim43aQ3TL54 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43aQ3TL54 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43aQ3TL54 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43aQ3TL54 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43aQ3TL54 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43aQ3TL54 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43aQ3TL54 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43aQ3TL54 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43aQ3TL54 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43aQ3TL54 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43aQ3TL54 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43aQ3TL54 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43aQ3TL54 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.42■□□□□ 0.38
Trim43aQ3TL54 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43aQ3TL54 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43aQ3TL54 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43aQ3TL54 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43aQ3TL54 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
Trim43aQ3TL54 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43aQ3TL54 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43aQ3TL54 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43aQ3TL54 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43aQ3TL54 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43aQ3TL54 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43aQ3TL54 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43aQ3TL54 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43aQ3TL54 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43aQ3TL54 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43aQ3TL54 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trim43aQ3TL54 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43aQ3TL54 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Trim43aQ3TL54 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43aQ3TL54 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43aQ3TL54 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trim43aQ3TL54 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43aQ3TL54 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.41■□□□□ 0.38
Trim43aQ3TL54 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43aQ3TL54 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.41■□□□□ 0.38
Trim43aQ3TL54 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trim43aQ3TL54 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.41■□□□□ 0.38
Trim43aQ3TL54 Il3ra-202ENSMUST00000223589 738 ntBASIC17.41■□□□□ 0.38
Trim43aQ3TL54 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43aQ3TL54 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43aQ3TL54 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trim43aQ3TL54 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trim43aQ3TL54 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43aQ3TL54 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43aQ3TL54 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.41■□□□□ 0.38
Trim43aQ3TL54 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43aQ3TL54 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43aQ3TL54 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43aQ3TL54 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43aQ3TL54 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Trim43aQ3TL54 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43aQ3TL54 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43aQ3TL54 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43aQ3TL54 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43aQ3TL54 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43aQ3TL54 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Trim43aQ3TL54 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.4■□□□□ 0.38
Trim43aQ3TL54 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trim43aQ3TL54 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43aQ3TL54 Gm7638-201ENSMUST00000121348 967 ntBASIC17.4■□□□□ 0.38
Trim43aQ3TL54 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43aQ3TL54 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.4■□□□□ 0.38
Trim43aQ3TL54 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43aQ3TL54 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43aQ3TL54 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43aQ3TL54 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43aQ3TL54 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43aQ3TL54 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43aQ3TL54 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43aQ3TL54 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43aQ3TL54 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trim43aQ3TL54 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trim43aQ3TL54 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trim43aQ3TL54 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trim43aQ3TL54 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Trim43aQ3TL54 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43aQ3TL54 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43aQ3TL54 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.39■□□□□ 0.37
Trim43aQ3TL54 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 145.1 ms