Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC24.3■■□□□ 1.48
NclP09405 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NclP09405 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NclP09405 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC24.3■■□□□ 1.48
NclP09405 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NclP09405 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NclP09405 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
NclP09405 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
NclP09405 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
NclP09405 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
NclP09405 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
NclP09405 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
NclP09405 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
NclP09405 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC24.29■■□□□ 1.48
NclP09405 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
NclP09405 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
NclP09405 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC24.29■■□□□ 1.48
NclP09405 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC24.29■■□□□ 1.48
NclP09405 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC24.29■■□□□ 1.48
NclP09405 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC24.29■■□□□ 1.48
NclP09405 AC159301.1-201ENSMUST00000225130 1182 ntBASIC24.29■■□□□ 1.48
NclP09405 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
NclP09405 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC24.29■■□□□ 1.48
NclP09405 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
NclP09405 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
NclP09405 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
NclP09405 Gm15165-201ENSMUST00000118140 502 ntBASIC24.28■■□□□ 1.48
NclP09405 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
NclP09405 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC24.28■■□□□ 1.48
NclP09405 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC24.28■■□□□ 1.48
NclP09405 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC24.28■■□□□ 1.48
NclP09405 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC24.28■■□□□ 1.48
NclP09405 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
NclP09405 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
NclP09405 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC24.28■■□□□ 1.48
NclP09405 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
NclP09405 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
NclP09405 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
NclP09405 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
NclP09405 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
NclP09405 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
NclP09405 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
NclP09405 Gm13884-201ENSMUST00000118103 829 ntBASIC24.27■■□□□ 1.48
NclP09405 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC24.27■■□□□ 1.48
NclP09405 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
NclP09405 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
NclP09405 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
NclP09405 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
NclP09405 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
NclP09405 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
NclP09405 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
NclP09405 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
NclP09405 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
NclP09405 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
NclP09405 Gm7292-201ENSMUST00000194706 2527 ntBASIC24.26■■□□□ 1.47
NclP09405 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
NclP09405 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
NclP09405 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
NclP09405 Gm27867-201ENSMUST00000184778 125 ntBASIC24.26■■□□□ 1.47
NclP09405 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC24.26■■□□□ 1.47
NclP09405 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
NclP09405 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
NclP09405 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC24.26■■□□□ 1.47
NclP09405 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
NclP09405 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
NclP09405 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
NclP09405 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
NclP09405 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
NclP09405 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC24.25■■□□□ 1.47
NclP09405 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC24.25■■□□□ 1.47
NclP09405 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC24.25■■□□□ 1.47
NclP09405 AC114585.2-202ENSMUST00000228094 426 ntBASIC24.25■■□□□ 1.47
NclP09405 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
NclP09405 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
NclP09405 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
NclP09405 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
NclP09405 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
NclP09405 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
NclP09405 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
NclP09405 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
NclP09405 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
NclP09405 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
NclP09405 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
NclP09405 Slc35b2-202ENSMUST00000223987 1766 ntBASIC24.24■■□□□ 1.47
NclP09405 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
NclP09405 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
NclP09405 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
NclP09405 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC24.24■■□□□ 1.47
NclP09405 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
NclP09405 Gm44771-201ENSMUST00000206975 626 ntBASIC24.24■■□□□ 1.47
NclP09405 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
NclP09405 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
NclP09405 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
NclP09405 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
NclP09405 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC24.24■■□□□ 1.47
NclP09405 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
NclP09405 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
NclP09405 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC24.24■■□□□ 1.47
NclP09405 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
NclP09405 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC24.23■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms