Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 MRPS33P2-201ENST00000507850 322 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 AC110792.2-201ENST00000510278 224 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC5.27□□□□□ -1.57
EPHB3P54753 AC006499.2-201ENST00000513470 337 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 RNU6-835P-201ENST00000516974 104 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 AC018442.3-201ENST00000523025 183 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC5.27□□□□□ -1.57
EPHB3P54753 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.27□□□□□ -1.57
EPHB3P54753 AC008083.2-201ENST00000546707 476 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.27□□□□□ -1.57
EPHB3P54753 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.27□□□□□ -1.57
EPHB3P54753 MIR3667-201ENST00000581025 74 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 AP001180.3-201ENST00000582221 145 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 AC090312.2-201ENST00000582687 378 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.27□□□□□ -1.57
EPHB3P54753 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.27□□□□□ -1.57
EPHB3P54753 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.27□□□□□ -1.57
EPHB3P54753 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.27□□□□□ -1.57
EPHB3P54753 AL161616.1-201ENST00000611867 286 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.27□□□□□ -1.57
EPHB3P54753 AL732618.1-201ENST00000623251 301 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 TPTEP1-208ENST00000636884 213 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC5.27□□□□□ -1.57
EPHB3P54753 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
EPHB3P54753 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
EPHB3P54753 AL359922.3-201ENST00000624779 1670 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
EPHB3P54753 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.27□□□□□ -1.57
EPHB3P54753 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
EPHB3P54753 AC097063.1-201ENST00000426714 1797 ntBASIC5.27□□□□□ -1.57
EPHB3P54753 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
EPHB3P54753 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
EPHB3P54753 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
EPHB3P54753 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
EPHB3P54753 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
EPHB3P54753 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
EPHB3P54753 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
EPHB3P54753 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.26□□□□□ -1.57
EPHB3P54753 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
EPHB3P54753 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
EPHB3P54753 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
EPHB3P54753 RNU6-282P-201ENST00000365357 103 ntBASIC5.26□□□□□ -1.57
EPHB3P54753 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
EPHB3P54753 SNORA56-201ENST00000383966 129 ntBASIC5.26□□□□□ -1.57
EPHB3P54753 SNORA70.10-201ENST00000384515 134 ntBASIC5.26□□□□□ -1.57
EPHB3P54753 MIR1305-201ENST00000408300 86 ntBASIC5.26□□□□□ -1.57
EPHB3P54753 MIR548P-201ENST00000408336 84 ntBASIC5.26□□□□□ -1.57
EPHB3P54753 RN7SKP266-201ENST00000410232 287 ntBASIC5.26□□□□□ -1.57
EPHB3P54753 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.26□□□□□ -1.57
EPHB3P54753 AL136133.1-201ENST00000413694 376 ntBASIC5.26□□□□□ -1.57
EPHB3P54753 NCOR1P3-201ENST00000420479 303 ntBASIC5.26□□□□□ -1.57
EPHB3P54753 COX6CP17-201ENST00000421389 185 ntBASIC5.26□□□□□ -1.57
EPHB3P54753 AL592293.2-201ENST00000422292 996 ntBASIC5.26□□□□□ -1.57
EPHB3P54753 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.26□□□□□ -1.57
EPHB3P54753 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.26□□□□□ -1.57
EPHB3P54753 TXNP5-201ENST00000441043 315 ntBASIC5.26□□□□□ -1.57
EPHB3P54753 BRK1P2-201ENST00000442875 223 ntBASIC5.26□□□□□ -1.57
EPHB3P54753 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.26□□□□□ -1.57
EPHB3P54753 AL035551.1-201ENST00000446931 348 ntBASIC5.26□□□□□ -1.57
EPHB3P54753 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.26□□□□□ -1.57
EPHB3P54753 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.26□□□□□ -1.57
EPHB3P54753 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.26□□□□□ -1.57
EPHB3P54753 AC097493.1-201ENST00000463958 372 ntBASIC5.26□□□□□ -1.57
EPHB3P54753 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.26□□□□□ -1.57
EPHB3P54753 AC015724.1-201ENST00000478577 156 ntBASIC5.26□□□□□ -1.57
EPHB3P54753 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.26□□□□□ -1.57
EPHB3P54753 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.26□□□□□ -1.57
EPHB3P54753 AL035404.1-201ENST00000497982 568 ntBASIC5.26□□□□□ -1.57
EPHB3P54753 AC006390.1-201ENST00000508068 283 ntBASIC5.26□□□□□ -1.57
EPHB3P54753 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.26□□□□□ -1.57
EPHB3P54753 OR7H2P-201ENST00000513483 306 ntBASIC5.26□□□□□ -1.57
EPHB3P54753 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC5.26□□□□□ -1.57
EPHB3P54753 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.26□□□□□ -1.57
EPHB3P54753 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.26□□□□□ -1.57
EPHB3P54753 AC093519.1-201ENST00000566109 298 ntBASIC5.26□□□□□ -1.57
EPHB3P54753 TVP23CP2-201ENST00000571473 623 ntBASIC5.26□□□□□ -1.57
EPHB3P54753 MIR4330-201ENST00000579077 105 ntBASIC5.26□□□□□ -1.57
EPHB3P54753 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
EPHB3P54753 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
EPHB3P54753 RN7SL52P-201ENST00000584271 284 ntBASIC5.26□□□□□ -1.57
EPHB3P54753 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.26□□□□□ -1.57
EPHB3P54753 RN7SL722P-201ENST00000617780 284 ntBASIC5.26□□□□□ -1.57
EPHB3P54753 RN7SL565P-201ENST00000618246 284 ntBASIC5.26□□□□□ -1.57
EPHB3P54753 RMST_7.1-201ENST00000621935 268 ntBASIC5.26□□□□□ -1.57
EPHB3P54753 AC024940.5-201ENST00000622889 474 ntBASIC5.26□□□□□ -1.57
EPHB3P54753 C2orf27A-204ENST00000623058 969 ntBASIC5.26□□□□□ -1.57
EPHB3P54753 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.26□□□□□ -1.57
EPHB3P54753 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.26□□□□□ -1.57
EPHB3P54753 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
EPHB3P54753 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
EPHB3P54753 Z95331.1-201ENST00000623075 23112 ntBASIC5.26□□□□□ -1.57
EPHB3P54753 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
EPHB3P54753 CASC19-284ENST00000642142 1868 ntBASIC5.26□□□□□ -1.57
EPHB3P54753 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
EPHB3P54753 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
EPHB3P54753 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.25□□□□□ -1.57
EPHB3P54753 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
EPHB3P54753 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
EPHB3P54753 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
EPHB3P54753 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 161.5 ms