Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 RN7SKP69-201ENST00000365390 305 ntBASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 Y_RNA.364-201ENST00000365532 101 ntBASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 RN7SKP81-201ENST00000365603 331 ntBASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 AL035422.1-201ENST00000414193 397 ntBASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 ACTR3BP6-201ENST00000422332 1241 ntBASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 H2AFZP6-201ENST00000444403 394 ntBASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 AC073109.1-201ENST00000445066 978 ntBASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 AC022431.1-201ENST00000450941 438 ntBASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 RPL12P25-201ENST00000455592 494 ntBASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 SNORD121B-201ENST00000458838 81 ntBASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 AC010655.3-201ENST00000478818 450 ntBASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 AF213884.1-201ENST00000488102 463 ntBASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 MIR3614-201ENST00000581261 86 ntBASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 MIR4443-201ENST00000585052 53 ntBASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 RPSAP75-201ENST00000605848 301 ntBASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 AC007485.1-201ENST00000616755 206 ntBASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 AC069234.4-201ENST00000621276 412 ntBASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 AC025034.2-201ENST00000623264 286 ntBASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 AC073488.6-201ENST00000632293 754 ntBASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 CASC19-246ENST00000641625 1606 ntBASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB9Q9Y5E1 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.42□□□□□ -1.38
PCDHB9Q9Y5E1 AKAP17BP-201ENST00000431706 2719 ntBASIC6.42□□□□□ -1.38
PCDHB9Q9Y5E1 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHB9Q9Y5E1 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.42□□□□□ -1.38
PCDHB9Q9Y5E1 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.42□□□□□ -1.38
PCDHB9Q9Y5E1 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHB9Q9Y5E1 AL445437.1-201ENST00000623157 3087 ntBASIC6.42□□□□□ -1.38
PCDHB9Q9Y5E1 API5P2-201ENST00000397055 1498 ntBASIC6.42□□□□□ -1.38
PCDHB9Q9Y5E1 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
PCDHB9Q9Y5E1 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
PCDHB9Q9Y5E1 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC6.42□□□□□ -1.38
PCDHB9Q9Y5E1 PNPT1P2-201ENST00000456768 2050 ntBASIC6.42□□□□□ -1.38
PCDHB9Q9Y5E1 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.42□□□□□ -1.38
PCDHB9Q9Y5E1 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.42□□□□□ -1.38
PCDHB9Q9Y5E1 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.42□□□□□ -1.38
PCDHB9Q9Y5E1 Y_RNA.252-201ENST00000364556 101 ntBASIC6.42□□□□□ -1.38
PCDHB9Q9Y5E1 RNU6-593P-201ENST00000364716 112 ntBASIC6.42□□□□□ -1.38
PCDHB9Q9Y5E1 SNORD115-7-201ENST00000365306 82 ntBASIC6.42□□□□□ -1.38
PCDHB9Q9Y5E1 SNORD116-11-201ENST00000383882 92 ntBASIC6.42□□□□□ -1.38
PCDHB9Q9Y5E1 AL136372.1-201ENST00000403060 228 ntBASIC6.42□□□□□ -1.38
PCDHB9Q9Y5E1 U3.43-201ENST00000410734 213 ntBASIC6.42□□□□□ -1.38
PCDHB9Q9Y5E1 RPL6P29-201ENST00000414863 865 ntBASIC6.42□□□□□ -1.38
PCDHB9Q9Y5E1 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC6.42□□□□□ -1.38
PCDHB9Q9Y5E1 AC096644.2-201ENST00000429278 159 ntBASIC6.42□□□□□ -1.38
PCDHB9Q9Y5E1 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC6.42□□□□□ -1.38
PCDHB9Q9Y5E1 AL451136.1-201ENST00000435399 325 ntBASIC6.42□□□□□ -1.38
PCDHB9Q9Y5E1 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.42□□□□□ -1.38
PCDHB9Q9Y5E1 AL645936.1-201ENST00000441979 518 ntBASIC6.42□□□□□ -1.38
PCDHB9Q9Y5E1 RN7SL714P-201ENST00000487050 298 ntBASIC6.42□□□□□ -1.38
PCDHB9Q9Y5E1 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.42□□□□□ -1.38
PCDHB9Q9Y5E1 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC6.42□□□□□ -1.38
PCDHB9Q9Y5E1 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC6.42□□□□□ -1.38
PCDHB9Q9Y5E1 AC024619.4-201ENST00000580924 316 ntBASIC6.42□□□□□ -1.38
PCDHB9Q9Y5E1 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.42□□□□□ -1.38
PCDHB9Q9Y5E1 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC6.42□□□□□ -1.38
PCDHB9Q9Y5E1 AC067852.5-201ENST00000589299 310 ntBASIC6.42□□□□□ -1.38
PCDHB9Q9Y5E1 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 156.2 ms