Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 AC106785.3-201ENST00000564064 847 ntBASIC4.19□□□□□ -1.74
SHANK3Q9BYB0 AC124856.1-201ENST00000600819 896 ntBASIC4.19□□□□□ -1.74
SHANK3Q9BYB0 AC018555.1-201ENST00000567548 1980 ntBASIC4.19□□□□□ -1.74
SHANK3Q9BYB0 ASNSP3-201ENST00000451989 1306 ntBASIC4.19□□□□□ -1.74
SHANK3Q9BYB0 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
SHANK3Q9BYB0 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SHANK3Q9BYB0 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SHANK3Q9BYB0 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SHANK3Q9BYB0 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SHANK3Q9BYB0 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.19□□□□□ -1.74
SHANK3Q9BYB0 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SHANK3Q9BYB0 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
SHANK3Q9BYB0 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
SHANK3Q9BYB0 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.18□□□□□ -1.74
SHANK3Q9BYB0 AC012065.2-201ENST00000421295 375 ntBASIC4.18□□□□□ -1.74
SHANK3Q9BYB0 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.18□□□□□ -1.74
SHANK3Q9BYB0 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
SHANK3Q9BYB0 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.18□□□□□ -1.74
SHANK3Q9BYB0 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC4.18□□□□□ -1.74
SHANK3Q9BYB0 AL356321.1-201ENST00000621360 228 ntBASIC4.18□□□□□ -1.74
SHANK3Q9BYB0 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SHANK3Q9BYB0 AC007496.3-201ENST00000624987 3443 ntBASIC4.18□□□□□ -1.74
SHANK3Q9BYB0 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SHANK3Q9BYB0 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.18□□□□□ -1.74
SHANK3Q9BYB0 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.18□□□□□ -1.74
SHANK3Q9BYB0 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SHANK3Q9BYB0 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
SHANK3Q9BYB0 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SHANK3Q9BYB0 AC017071.1-201ENST00000564407 2204 ntBASIC4.18□□□□□ -1.74
SHANK3Q9BYB0 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.18□□□□□ -1.74
SHANK3Q9BYB0 AL513477.1-202ENST00000417061 214 ntBASIC4.18□□□□□ -1.74
SHANK3Q9BYB0 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.18□□□□□ -1.74
SHANK3Q9BYB0 AC132942.1-201ENST00000486753 483 ntBASIC4.18□□□□□ -1.74
SHANK3Q9BYB0 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.18□□□□□ -1.74
SHANK3Q9BYB0 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.18□□□□□ -1.74
SHANK3Q9BYB0 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC4.18□□□□□ -1.74
SHANK3Q9BYB0 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.18□□□□□ -1.74
SHANK3Q9BYB0 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.18□□□□□ -1.74
SHANK3Q9BYB0 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.17□□□□□ -1.74
SHANK3Q9BYB0 MTND4P26-201ENST00000415971 1359 ntBASIC4.17□□□□□ -1.74
SHANK3Q9BYB0 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SHANK3Q9BYB0 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SHANK3Q9BYB0 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SHANK3Q9BYB0 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SHANK3Q9BYB0 RNA5SP322-201ENST00000363617 119 ntBASIC4.17□□□□□ -1.74
SHANK3Q9BYB0 SNORA70B-201ENST00000384210 135 ntBASIC4.17□□□□□ -1.74
SHANK3Q9BYB0 ACTG1P13-201ENST00000486987 1043 ntBASIC4.17□□□□□ -1.74
SHANK3Q9BYB0 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.17□□□□□ -1.74
SHANK3Q9BYB0 AC017037.2-201ENST00000513850 890 ntBASIC4.17□□□□□ -1.74
SHANK3Q9BYB0 RN7SKP31-201ENST00000516354 278 ntBASIC4.17□□□□□ -1.74
SHANK3Q9BYB0 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.17□□□□□ -1.74
SHANK3Q9BYB0 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.17□□□□□ -1.74
SHANK3Q9BYB0 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SHANK3Q9BYB0 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.17□□□□□ -1.74
SHANK3Q9BYB0 XKRY2-202ENST00000623874 1581 ntBASIC4.16□□□□□ -1.74
SHANK3Q9BYB0 XKRY-202ENST00000624960 1581 ntBASIC4.16□□□□□ -1.74
SHANK3Q9BYB0 RSL24D1P4-201ENST00000400938 484 ntBASIC4.16□□□□□ -1.74
SHANK3Q9BYB0 AL160275.2-201ENST00000412010 394 ntBASIC4.16□□□□□ -1.74
SHANK3Q9BYB0 BMS1P22-201ENST00000414726 313 ntBASIC4.16□□□□□ -1.74
SHANK3Q9BYB0 MTND2P11-201ENST00000423638 648 ntBASIC4.16□□□□□ -1.74
SHANK3Q9BYB0 ISCA1P6-201ENST00000427740 390 ntBASIC4.16□□□□□ -1.74
SHANK3Q9BYB0 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC4.16□□□□□ -1.74
SHANK3Q9BYB0 AC126389.1-201ENST00000477436 290 ntBASIC4.16□□□□□ -1.74
SHANK3Q9BYB0 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SHANK3Q9BYB0 RN7SKP132-201ENST00000516001 208 ntBASIC4.16□□□□□ -1.74
SHANK3Q9BYB0 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.16□□□□□ -1.74
SHANK3Q9BYB0 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.16□□□□□ -1.74
SHANK3Q9BYB0 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.16□□□□□ -1.74
SHANK3Q9BYB0 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.16□□□□□ -1.74
SHANK3Q9BYB0 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SHANK3Q9BYB0 AL451142.2-201ENST00000429076 2090 ntBASIC4.16□□□□□ -1.74
SHANK3Q9BYB0 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
SHANK3Q9BYB0 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SHANK3Q9BYB0 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SHANK3Q9BYB0 AP003122.5-201ENST00000527668 3766 ntBASIC4.16□□□□□ -1.74
SHANK3Q9BYB0 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.16□□□□□ -1.74
SHANK3Q9BYB0 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SHANK3Q9BYB0 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
SHANK3Q9BYB0 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SHANK3Q9BYB0 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SHANK3Q9BYB0 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SHANK3Q9BYB0 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
SHANK3Q9BYB0 RPS4XP8-201ENST00000402039 771 ntBASIC4.15□□□□□ -1.74
SHANK3Q9BYB0 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.15□□□□□ -1.74
SHANK3Q9BYB0 AC011242.1-201ENST00000433596 1158 ntBASIC4.15□□□□□ -1.74
SHANK3Q9BYB0 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.15□□□□□ -1.74
SHANK3Q9BYB0 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.74
SHANK3Q9BYB0 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.15□□□□□ -1.74
SHANK3Q9BYB0 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.15□□□□□ -1.74
SHANK3Q9BYB0 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.15□□□□□ -1.74
SHANK3Q9BYB0 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SHANK3Q9BYB0 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
SHANK3Q9BYB0 NCAPGP1-201ENST00000505112 1814 ntBASIC4.15□□□□□ -1.74
SHANK3Q9BYB0 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SHANK3Q9BYB0 AC007336.1-201ENST00000576365 3828 ntBASIC4.15□□□□□ -1.75
SHANK3Q9BYB0 AC000123.3-201ENST00000624029 4975 ntBASIC4.15□□□□□ -1.75
SHANK3Q9BYB0 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
SHANK3Q9BYB0 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.15□□□□□ -1.75
SHANK3Q9BYB0 RNA5SP184-201ENST00000411071 108 ntBASIC4.15□□□□□ -1.75
SHANK3Q9BYB0 AC126124.2-201ENST00000413542 321 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 160.9 ms