Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 AC108734.1-201ENST00000439549 399 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 PPIAP20-201ENST00000449839 135 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 HMGB3P22-202ENST00000451823 572 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 AC083904.1-201ENST00000487828 231 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 AC024558.1-201ENST00000505008 528 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 MTCO2P24-201ENST00000515611 426 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 RNA5SP441-201ENST00000516809 88 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 RNU6-1137P-201ENST00000517073 99 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 RPL21P12-201ENST00000559810 515 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 AP003115.1-201ENST00000569849 463 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 AC053481.3-201ENST00000577881 843 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 MIR4424-201ENST00000585257 86 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 AC007938.3-201ENST00000604965 623 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 AL121992.2-201ENST00000606262 256 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 SNORD96A-201ENST00000606577 79 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 AC004241.2-201ENST00000614562 444 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 AC096861.1-201ENST00000616652 240 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 MIR6729-201ENST00000618194 65 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 AC241377.1-201ENST00000619797 406 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 WBP11P1-201ENST00000562560 1931 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 MAPK10-357ENST00000641831 2858 ntBASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 AC004158.1-201ENST00000564508 4319 ntBASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 RNU5E-8P-201ENST00000363502 116 ntBASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 U3.52-201ENST00000384034 216 ntBASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 CISD1P1-201ENST00000393907 327 ntBASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 AL606923.1-201ENST00000406616 190 ntBASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 RN7SKP158-201ENST00000410453 326 ntBASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 RN7SKP144-201ENST00000411108 279 ntBASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 ARL5AP1-201ENST00000418991 388 ntBASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 RPL7L1P10-201ENST00000427790 463 ntBASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 TIMM9P1-201ENST00000436122 256 ntBASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 POU5F1P5-201ENST00000445059 658 ntBASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 TVP23CP1-201ENST00000450317 639 ntBASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 RNU6-1208P-201ENST00000459588 107 ntBASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 AC022415.1-202ENST00000486612 523 ntBASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 AC005912.1-201ENST00000495392 255 ntBASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 AC011411.1-201ENST00000509592 876 ntBASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 PRMT5P1-201ENST00000514351 598 ntBASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 MYL12AP1-201ENST00000518490 515 ntBASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 AC103843.2-201ENST00000530523 682 ntBASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 MGST1-215ENST00000540056 546 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 OR1E3-201ENST00000575608 948 ntBASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 MIR3942-201ENST00000585264 109 ntBASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 RPL23AP92-201ENST00000603609 255 ntBASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 AL352984.2-202ENST00000613699 155 ntBASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 uc_338.31-201ENST00000615595 186 ntBASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 AC007546.1-201ENST00000619452 559 ntBASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 AL122023.1-201ENST00000622847 530 ntBASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms