Protein–RNA interactions for Protein: E0CX42

Gm4491, Predicted gene 4491, mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4491E0CX42 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Gm4491E0CX42 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Gm4491E0CX42 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Gm4491E0CX42 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Gm4491E0CX42 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Gm4491E0CX42 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Gm4491E0CX42 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Gm4491E0CX42 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC9.05□□□□□ -0.96
Gm4491E0CX42 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Gm4491E0CX42 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC9.05□□□□□ -0.96
Gm4491E0CX42 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Gm4491E0CX42 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Gm4491E0CX42 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Gm4491E0CX42 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Gm4491E0CX42 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Gm4491E0CX42 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Gm4491E0CX42 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Gm4491E0CX42 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Gm4491E0CX42 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Gm4491E0CX42 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Gm4491E0CX42 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Gm4491E0CX42 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Gm4491E0CX42 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Gm4491E0CX42 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC9.04□□□□□ -0.96
Gm4491E0CX42 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Gm4491E0CX42 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Gm4491E0CX42 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Gm4491E0CX42 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Gm4491E0CX42 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Gm4491E0CX42 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC9.04□□□□□ -0.96
Gm4491E0CX42 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Gm4491E0CX42 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Gm4491E0CX42 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Gm4491E0CX42 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Gm4491E0CX42 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Gm4491E0CX42 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Gm4491E0CX42 Alkbh1-212ENSMUST00000185301 408 ntBASIC9.04□□□□□ -0.96
Gm4491E0CX42 AC122769.4-201ENSMUST00000228166 901 ntBASIC9.04□□□□□ -0.96
Gm4491E0CX42 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Gm4491E0CX42 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Gm4491E0CX42 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Gm4491E0CX42 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC9.04□□□□□ -0.96
Gm4491E0CX42 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Gm4491E0CX42 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Gm4491E0CX42 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Gm4491E0CX42 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Gm4491E0CX42 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Gm4491E0CX42 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Gm4491E0CX42 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Gm4491E0CX42 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Gm4491E0CX42 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Gm4491E0CX42 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Gm4491E0CX42 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Gm4491E0CX42 Gm21596-201ENSMUST00000178049 1316 ntBASIC9.04□□□□□ -0.96
Gm4491E0CX42 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Gm4491E0CX42 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Gm4491E0CX42 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC9.03□□□□□ -0.96
Gm4491E0CX42 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Gm4491E0CX42 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Gm4491E0CX42 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
Gm4491E0CX42 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Gm4491E0CX42 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Gm4491E0CX42 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Gm4491E0CX42 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Gm4491E0CX42 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Gm4491E0CX42 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Gm4491E0CX42 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Gm4491E0CX42 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Gm4491E0CX42 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC9.03□□□□□ -0.96
Gm4491E0CX42 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Gm4491E0CX42 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Gm4491E0CX42 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Gm4491E0CX42 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Gm4491E0CX42 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Gm4491E0CX42 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Gm4491E0CX42 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Gm4491E0CX42 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Gm4491E0CX42 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Gm4491E0CX42 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
Gm4491E0CX42 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
Gm4491E0CX42 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Gm4491E0CX42 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
Gm4491E0CX42 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Gm4491E0CX42 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Gm4491E0CX42 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC9.03□□□□□ -0.96
Gm4491E0CX42 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Gm4491E0CX42 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Gm4491E0CX42 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Gm4491E0CX42 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Gm4491E0CX42 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Gm4491E0CX42 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Gm4491E0CX42 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC9.02□□□□□ -0.96
Gm4491E0CX42 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC9.02□□□□□ -0.96
Gm4491E0CX42 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC9.02□□□□□ -0.96
Gm4491E0CX42 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Gm4491E0CX42 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Gm4491E0CX42 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC9.02□□□□□ -0.97
Gm4491E0CX42 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm4491E0CX42 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm4491E0CX42 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms