Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
PCDHB9Q9Y5E1 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.9□□□□□ -1.31
PCDHB9Q9Y5E1 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
PCDHB9Q9Y5E1 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
PCDHB9Q9Y5E1 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
PCDHB9Q9Y5E1 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
PCDHB9Q9Y5E1 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
PCDHB9Q9Y5E1 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.9□□□□□ -1.31
PCDHB9Q9Y5E1 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.9□□□□□ -1.31
PCDHB9Q9Y5E1 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
PCDHB9Q9Y5E1 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 Y_RNA.445-201ENST00000384168 102 ntBASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 SNORD116-29-201ENST00000384516 83 ntBASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 RNU6-831P-201ENST00000384548 107 ntBASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 RNU6-606P-201ENST00000384721 111 ntBASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 RNU6-1105P-201ENST00000384774 107 ntBASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 CHEK2P3-201ENST00000416118 248 ntBASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 HSPE1P1-201ENST00000421494 318 ntBASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 AC006548.1-201ENST00000427470 102 ntBASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 AL389925.1-201ENST00000432257 728 ntBASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 AL445466.1-201ENST00000448432 357 ntBASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 MEMO1P4-201ENST00000453590 386 ntBASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 AP1S2P1-201ENST00000457344 379 ntBASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 SLC25A51P1-201ENST00000468432 871 ntBASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 TAF8-207ENST00000482432 556 ntTSL 2 BASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 AC011005.3-201ENST00000491624 395 ntBASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 RNU6-559P-201ENST00000516151 98 ntBASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 RNU6-410P-201ENST00000517006 107 ntBASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 Y_RNA.718-201ENST00000517110 102 ntBASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 SNORA25.17-201ENST00000517184 124 ntBASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 DNAJC8P1-201ENST00000554535 372 ntBASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 AL356432.3-201ENST00000568952 465 ntBASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 AC098848.2-201ENST00000588023 330 ntBASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 MIR6071-201ENST00000616741 78 ntBASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 CR381572.1-201ENST00000625098 102 ntBASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 AL133216.2-202ENST00000634512 349 ntBASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 OR2L1P-202ENST00000641567 1023 ntBASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB9Q9Y5E1 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 SALL4P7-201ENST00000555779 3120 ntBASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 RNU1-5P-201ENST00000362684 144 ntBASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 Y_RNA.231-201ENST00000364358 102 ntBASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 RNU6-921P-201ENST00000384361 107 ntBASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 EIF5P1-201ENST00000400019 1231 ntBASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 CYCSP17-201ENST00000407870 315 ntBASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 RN7SKP86-201ENST00000410454 332 ntBASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 Y_RNA.615-201ENST00000410769 117 ntBASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 AL358176.2-201ENST00000425769 204 ntBASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 305.1 ms