Protein–RNA interactions for Protein: Q6NV83

U2surp, U2 snRNP-associated SURP motif-containing protein, mousemouse

Known RBP Predictions only

Length 1,029 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2surpQ6NV83 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
U2surpQ6NV83 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC21.42■■□□□ 1.02
U2surpQ6NV83 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
U2surpQ6NV83 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
U2surpQ6NV83 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC21.42■■□□□ 1.02
U2surpQ6NV83 Gm18421-201ENSMUST00000204122 625 ntBASIC21.42■■□□□ 1.02
U2surpQ6NV83 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
U2surpQ6NV83 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
U2surpQ6NV83 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
U2surpQ6NV83 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
U2surpQ6NV83 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
U2surpQ6NV83 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
U2surpQ6NV83 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
U2surpQ6NV83 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
U2surpQ6NV83 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
U2surpQ6NV83 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
U2surpQ6NV83 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
U2surpQ6NV83 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC21.41■■□□□ 1.02
U2surpQ6NV83 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
U2surpQ6NV83 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
U2surpQ6NV83 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
U2surpQ6NV83 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC21.41■■□□□ 1.02
U2surpQ6NV83 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
U2surpQ6NV83 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
U2surpQ6NV83 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
U2surpQ6NV83 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
U2surpQ6NV83 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
U2surpQ6NV83 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
U2surpQ6NV83 Ank2-226ENSMUST00000189368 339 ntBASIC21.4■■□□□ 1.02
U2surpQ6NV83 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
U2surpQ6NV83 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
U2surpQ6NV83 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
U2surpQ6NV83 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
U2surpQ6NV83 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
U2surpQ6NV83 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
U2surpQ6NV83 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
U2surpQ6NV83 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
U2surpQ6NV83 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
U2surpQ6NV83 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC21.39■■□□□ 1.02
U2surpQ6NV83 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
U2surpQ6NV83 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
U2surpQ6NV83 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
U2surpQ6NV83 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
U2surpQ6NV83 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC21.39■■□□□ 1.01
U2surpQ6NV83 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC21.39■■□□□ 1.01
U2surpQ6NV83 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
U2surpQ6NV83 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
U2surpQ6NV83 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
U2surpQ6NV83 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
U2surpQ6NV83 Zkscan4-202ENSMUST00000225845 1506 ntBASIC21.39■■□□□ 1.01
U2surpQ6NV83 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
U2surpQ6NV83 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
U2surpQ6NV83 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
U2surpQ6NV83 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC21.38■■□□□ 1.01
U2surpQ6NV83 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
U2surpQ6NV83 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC21.38■■□□□ 1.01
U2surpQ6NV83 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
U2surpQ6NV83 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
U2surpQ6NV83 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
U2surpQ6NV83 AC130713.1-201ENSMUST00000228853 1096 ntBASIC21.38■■□□□ 1.01
U2surpQ6NV83 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
U2surpQ6NV83 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
U2surpQ6NV83 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
U2surpQ6NV83 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
U2surpQ6NV83 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
U2surpQ6NV83 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
U2surpQ6NV83 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
U2surpQ6NV83 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
U2surpQ6NV83 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
U2surpQ6NV83 Zfp264-201ENSMUST00000208656 1563 ntBASIC21.37■■□□□ 1.01
U2surpQ6NV83 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
U2surpQ6NV83 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
U2surpQ6NV83 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC21.37■■□□□ 1.01
U2surpQ6NV83 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC21.37■■□□□ 1.01
U2surpQ6NV83 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
U2surpQ6NV83 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
U2surpQ6NV83 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
U2surpQ6NV83 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
U2surpQ6NV83 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
U2surpQ6NV83 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
U2surpQ6NV83 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
U2surpQ6NV83 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
U2surpQ6NV83 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
U2surpQ6NV83 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
U2surpQ6NV83 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
U2surpQ6NV83 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
U2surpQ6NV83 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
U2surpQ6NV83 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
U2surpQ6NV83 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
U2surpQ6NV83 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
U2surpQ6NV83 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
U2surpQ6NV83 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
U2surpQ6NV83 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
U2surpQ6NV83 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
U2surpQ6NV83 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
U2surpQ6NV83 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
U2surpQ6NV83 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
U2surpQ6NV83 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
U2surpQ6NV83 Gm15635-204ENSMUST00000208024 2539 ntBASIC21.35■■□□□ 1.01
U2surpQ6NV83 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms