Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43aQ3TL54 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43aQ3TL54 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trim43aQ3TL54 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Trim43aQ3TL54 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trim43aQ3TL54 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43aQ3TL54 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43aQ3TL54 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43aQ3TL54 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43aQ3TL54 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43aQ3TL54 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43aQ3TL54 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43aQ3TL54 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43aQ3TL54 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43aQ3TL54 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43aQ3TL54 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.66■□□□□ 0.42
Trim43aQ3TL54 Gm12382-201ENSMUST00000122005 922 ntBASIC17.66■□□□□ 0.42
Trim43aQ3TL54 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Trim43aQ3TL54 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43aQ3TL54 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43aQ3TL54 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43aQ3TL54 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43aQ3TL54 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43aQ3TL54 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43aQ3TL54 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43aQ3TL54 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43aQ3TL54 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43aQ3TL54 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43aQ3TL54 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43aQ3TL54 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43aQ3TL54 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43aQ3TL54 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43aQ3TL54 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43aQ3TL54 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trim43aQ3TL54 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43aQ3TL54 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43aQ3TL54 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43aQ3TL54 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Trim43aQ3TL54 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43aQ3TL54 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.65■□□□□ 0.42
Trim43aQ3TL54 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.65■□□□□ 0.42
Trim43aQ3TL54 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.65■□□□□ 0.42
Trim43aQ3TL54 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43aQ3TL54 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43aQ3TL54 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.65■□□□□ 0.42
Trim43aQ3TL54 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43aQ3TL54 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.65■□□□□ 0.42
Trim43aQ3TL54 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43aQ3TL54 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43aQ3TL54 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trim43aQ3TL54 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43aQ3TL54 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.65■□□□□ 0.42
Trim43aQ3TL54 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43aQ3TL54 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43aQ3TL54 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim43aQ3TL54 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim43aQ3TL54 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim43aQ3TL54 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trim43aQ3TL54 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.64■□□□□ 0.41
Trim43aQ3TL54 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.64■□□□□ 0.41
Trim43aQ3TL54 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim43aQ3TL54 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim43aQ3TL54 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim43aQ3TL54 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim43aQ3TL54 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim43aQ3TL54 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim43aQ3TL54 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim43aQ3TL54 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim43aQ3TL54 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim43aQ3TL54 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim43aQ3TL54 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43aQ3TL54 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43aQ3TL54 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43aQ3TL54 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trim43aQ3TL54 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43aQ3TL54 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43aQ3TL54 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43aQ3TL54 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43aQ3TL54 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trim43aQ3TL54 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43aQ3TL54 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.63■□□□□ 0.41
Trim43aQ3TL54 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.63■□□□□ 0.41
Trim43aQ3TL54 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43aQ3TL54 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.63■□□□□ 0.41
Trim43aQ3TL54 Gm37025-201ENSMUST00000195159 829 ntBASIC17.63■□□□□ 0.41
Trim43aQ3TL54 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43aQ3TL54 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.63■□□□□ 0.41
Trim43aQ3TL54 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43aQ3TL54 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43aQ3TL54 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trim43aQ3TL54 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43aQ3TL54 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trim43aQ3TL54 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Trim43aQ3TL54 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43aQ3TL54 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43aQ3TL54 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43aQ3TL54 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43aQ3TL54 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Trim43aQ3TL54 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43aQ3TL54 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms