Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmgn5Q9JL35 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hmgn5Q9JL35 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hmgn5Q9JL35 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hmgn5Q9JL35 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hmgn5Q9JL35 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hmgn5Q9JL35 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Hmgn5Q9JL35 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Hmgn5Q9JL35 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hmgn5Q9JL35 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hmgn5Q9JL35 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hmgn5Q9JL35 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hmgn5Q9JL35 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hmgn5Q9JL35 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hmgn5Q9JL35 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hmgn5Q9JL35 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hmgn5Q9JL35 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Hmgn5Q9JL35 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hmgn5Q9JL35 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgn5Q9JL35 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgn5Q9JL35 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgn5Q9JL35 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgn5Q9JL35 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgn5Q9JL35 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgn5Q9JL35 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.86■□□□□ 0.61
Hmgn5Q9JL35 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.86■□□□□ 0.61
Hmgn5Q9JL35 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgn5Q9JL35 Mtag2-201ENSMUST00000058665 714 ntBASIC18.86■□□□□ 0.61
Hmgn5Q9JL35 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgn5Q9JL35 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgn5Q9JL35 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgn5Q9JL35 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgn5Q9JL35 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgn5Q9JL35 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Hmgn5Q9JL35 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgn5Q9JL35 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgn5Q9JL35 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgn5Q9JL35 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgn5Q9JL35 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.85■□□□□ 0.61
Hmgn5Q9JL35 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Hmgn5Q9JL35 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hmgn5Q9JL35 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hmgn5Q9JL35 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hmgn5Q9JL35 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.85■□□□□ 0.61
Hmgn5Q9JL35 Gm10138-203ENSMUST00000206952 366 ntBASIC18.85■□□□□ 0.61
Hmgn5Q9JL35 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.85■□□□□ 0.61
Hmgn5Q9JL35 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hmgn5Q9JL35 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hmgn5Q9JL35 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hmgn5Q9JL35 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hmgn5Q9JL35 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hmgn5Q9JL35 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hmgn5Q9JL35 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.85■□□□□ 0.61
Hmgn5Q9JL35 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hmgn5Q9JL35 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hmgn5Q9JL35 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hmgn5Q9JL35 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmgn5Q9JL35 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Hmgn5Q9JL35 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmgn5Q9JL35 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Hmgn5Q9JL35 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmgn5Q9JL35 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmgn5Q9JL35 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmgn5Q9JL35 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Hmgn5Q9JL35 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmgn5Q9JL35 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmgn5Q9JL35 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmgn5Q9JL35 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmgn5Q9JL35 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmgn5Q9JL35 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.84■□□□□ 0.61
Hmgn5Q9JL35 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmgn5Q9JL35 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmgn5Q9JL35 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
Hmgn5Q9JL35 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmgn5Q9JL35 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hmgn5Q9JL35 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hmgn5Q9JL35 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hmgn5Q9JL35 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Hmgn5Q9JL35 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmgn5Q9JL35 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.84■□□□□ 0.61
Hmgn5Q9JL35 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hmgn5Q9JL35 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hmgn5Q9JL35 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hmgn5Q9JL35 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hmgn5Q9JL35 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hmgn5Q9JL35 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Hmgn5Q9JL35 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC18.83■□□□□ 0.61
Hmgn5Q9JL35 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hmgn5Q9JL35 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.83■□□□□ 0.6
Hmgn5Q9JL35 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hmgn5Q9JL35 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.83■□□□□ 0.6
Hmgn5Q9JL35 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hmgn5Q9JL35 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hmgn5Q9JL35 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Hmgn5Q9JL35 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hmgn5Q9JL35 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hmgn5Q9JL35 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.83■□□□□ 0.6
Hmgn5Q9JL35 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Hmgn5Q9JL35 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmgn5Q9JL35 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms