Protein–RNA interactions for Protein: Q6NV83

U2surp, U2 snRNP-associated SURP motif-containing protein, mousemouse

Known RBP Predictions only

Length 1,029 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2surpQ6NV83 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
U2surpQ6NV83 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
U2surpQ6NV83 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
U2surpQ6NV83 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
U2surpQ6NV83 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
U2surpQ6NV83 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
U2surpQ6NV83 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
U2surpQ6NV83 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC21.54■■□□□ 1.04
U2surpQ6NV83 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
U2surpQ6NV83 Gm7284-201ENSMUST00000131667 944 ntBASIC21.54■■□□□ 1.04
U2surpQ6NV83 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC21.54■■□□□ 1.04
U2surpQ6NV83 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC21.54■■□□□ 1.04
U2surpQ6NV83 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
U2surpQ6NV83 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
U2surpQ6NV83 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
U2surpQ6NV83 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
U2surpQ6NV83 Gm45203-201ENSMUST00000206384 1831 ntBASIC21.54■■□□□ 1.04
U2surpQ6NV83 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
U2surpQ6NV83 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
U2surpQ6NV83 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
U2surpQ6NV83 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
U2surpQ6NV83 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
U2surpQ6NV83 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
U2surpQ6NV83 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
U2surpQ6NV83 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
U2surpQ6NV83 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
U2surpQ6NV83 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
U2surpQ6NV83 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
U2surpQ6NV83 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
U2surpQ6NV83 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC21.53■■□□□ 1.04
U2surpQ6NV83 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC21.53■■□□□ 1.04
U2surpQ6NV83 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
U2surpQ6NV83 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
U2surpQ6NV83 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
U2surpQ6NV83 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
U2surpQ6NV83 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
U2surpQ6NV83 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
U2surpQ6NV83 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
U2surpQ6NV83 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
U2surpQ6NV83 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC21.52■■□□□ 1.04
U2surpQ6NV83 Gm14859-201ENSMUST00000117752 357 ntBASIC21.52■■□□□ 1.04
U2surpQ6NV83 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
U2surpQ6NV83 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC21.52■■□□□ 1.04
U2surpQ6NV83 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
U2surpQ6NV83 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
U2surpQ6NV83 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
U2surpQ6NV83 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
U2surpQ6NV83 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
U2surpQ6NV83 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
U2surpQ6NV83 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
U2surpQ6NV83 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
U2surpQ6NV83 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
U2surpQ6NV83 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
U2surpQ6NV83 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
U2surpQ6NV83 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
U2surpQ6NV83 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
U2surpQ6NV83 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
U2surpQ6NV83 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
U2surpQ6NV83 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
U2surpQ6NV83 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
U2surpQ6NV83 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
U2surpQ6NV83 Gm11950-201ENSMUST00000121615 838 ntBASIC21.51■■□□□ 1.03
U2surpQ6NV83 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
U2surpQ6NV83 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
U2surpQ6NV83 Gm10459-201ENSMUST00000202708 1155 ntBASIC21.51■■□□□ 1.03
U2surpQ6NV83 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
U2surpQ6NV83 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
U2surpQ6NV83 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
U2surpQ6NV83 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
U2surpQ6NV83 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
U2surpQ6NV83 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
U2surpQ6NV83 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
U2surpQ6NV83 Cxcl14-202ENSMUST00000224801 1467 ntBASIC21.51■■□□□ 1.03
U2surpQ6NV83 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
U2surpQ6NV83 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
U2surpQ6NV83 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
U2surpQ6NV83 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
U2surpQ6NV83 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
U2surpQ6NV83 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC21.5■■□□□ 1.03
U2surpQ6NV83 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
U2surpQ6NV83 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
U2surpQ6NV83 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
U2surpQ6NV83 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
U2surpQ6NV83 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC21.49■■□□□ 1.03
U2surpQ6NV83 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
U2surpQ6NV83 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC21.49■■□□□ 1.03
U2surpQ6NV83 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
U2surpQ6NV83 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
U2surpQ6NV83 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
U2surpQ6NV83 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
U2surpQ6NV83 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
U2surpQ6NV83 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
U2surpQ6NV83 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
U2surpQ6NV83 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
U2surpQ6NV83 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
U2surpQ6NV83 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
U2surpQ6NV83 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
U2surpQ6NV83 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC21.49■■□□□ 1.03
U2surpQ6NV83 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
U2surpQ6NV83 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 122.3 ms