Protein–RNA interactions for Protein: Q61116

Znf235, Zinc finger protein 235, mousemouse

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf235Q61116 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.45■□□□□ 0.38
Znf235Q61116 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.45■□□□□ 0.38
Znf235Q61116 Gm27459-201ENSMUST00000184860 107 ntBASIC17.45■□□□□ 0.38
Znf235Q61116 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Znf235Q61116 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Znf235Q61116 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Znf235Q61116 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Znf235Q61116 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Znf235Q61116 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Znf235Q61116 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.45■□□□□ 0.38
Znf235Q61116 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Znf235Q61116 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.44■□□□□ 0.38
Znf235Q61116 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Znf235Q61116 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Znf235Q61116 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Znf235Q61116 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Znf235Q61116 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Znf235Q61116 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.44■□□□□ 0.38
Znf235Q61116 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.44■□□□□ 0.38
Znf235Q61116 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Znf235Q61116 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Znf235Q61116 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.44■□□□□ 0.38
Znf235Q61116 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.44■□□□□ 0.38
Znf235Q61116 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Znf235Q61116 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Znf235Q61116 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Znf235Q61116 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Znf235Q61116 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Znf235Q61116 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Znf235Q61116 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Znf235Q61116 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Znf235Q61116 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.43■□□□□ 0.38
Znf235Q61116 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Znf235Q61116 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Znf235Q61116 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Znf235Q61116 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.43■□□□□ 0.38
Znf235Q61116 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Znf235Q61116 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Znf235Q61116 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.42■□□□□ 0.38
Znf235Q61116 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Znf235Q61116 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Znf235Q61116 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Znf235Q61116 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Znf235Q61116 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Znf235Q61116 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Znf235Q61116 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Znf235Q61116 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.42■□□□□ 0.38
Znf235Q61116 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Znf235Q61116 Gm36967-201ENSMUST00000193814 266 ntBASIC17.42■□□□□ 0.38
Znf235Q61116 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Znf235Q61116 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Znf235Q61116 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Znf235Q61116 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Znf235Q61116 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.42■□□□□ 0.38
Znf235Q61116 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Znf235Q61116 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Znf235Q61116 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Znf235Q61116 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Znf235Q61116 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.41■□□□□ 0.38
Znf235Q61116 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Znf235Q61116 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Znf235Q61116 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Znf235Q61116 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Znf235Q61116 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Znf235Q61116 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Znf235Q61116 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Znf235Q61116 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.41■□□□□ 0.38
Znf235Q61116 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.41■□□□□ 0.38
Znf235Q61116 Rprl3-201ENSMUST00000157400 290 ntBASIC17.41■□□□□ 0.38
Znf235Q61116 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Znf235Q61116 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Znf235Q61116 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Znf235Q61116 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.41■□□□□ 0.38
Znf235Q61116 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.41■□□□□ 0.38
Znf235Q61116 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Znf235Q61116 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Znf235Q61116 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Znf235Q61116 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Znf235Q61116 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Znf235Q61116 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Znf235Q61116 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Znf235Q61116 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Znf235Q61116 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.4■□□□□ 0.38
Znf235Q61116 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Znf235Q61116 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Znf235Q61116 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Znf235Q61116 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Znf235Q61116 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Znf235Q61116 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Znf235Q61116 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Znf235Q61116 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Znf235Q61116 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Znf235Q61116 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Znf235Q61116 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.39■□□□□ 0.37
Znf235Q61116 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.39■□□□□ 0.37
Znf235Q61116 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Znf235Q61116 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Znf235Q61116 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.39■□□□□ 0.37
Znf235Q61116 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.39■□□□□ 0.37
Znf235Q61116 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms