Protein–RNA interactions for Protein: Q9JJC9

Herpud2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud2Q9JJC9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Herpud2Q9JJC9 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Herpud2Q9JJC9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.84■■□□□ 1.41
Herpud2Q9JJC9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Herpud2Q9JJC9 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Herpud2Q9JJC9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Herpud2Q9JJC9 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.83■■□□□ 1.4
Herpud2Q9JJC9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Herpud2Q9JJC9 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.82■■□□□ 1.4
Herpud2Q9JJC9 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.81■■□□□ 1.4
Herpud2Q9JJC9 Gm37136-201ENSMUST00000194368 194 ntBASIC23.81■■□□□ 1.4
Herpud2Q9JJC9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Herpud2Q9JJC9 Gm4799-201ENSMUST00000095396 657 ntBASIC23.81■■□□□ 1.4
Herpud2Q9JJC9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Herpud2Q9JJC9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.8■■□□□ 1.4
Herpud2Q9JJC9 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Herpud2Q9JJC9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.79■■□□□ 1.4
Herpud2Q9JJC9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Herpud2Q9JJC9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Herpud2Q9JJC9 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Herpud2Q9JJC9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Herpud2Q9JJC9 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Herpud2Q9JJC9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Herpud2Q9JJC9 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Herpud2Q9JJC9 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Herpud2Q9JJC9 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Herpud2Q9JJC9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Herpud2Q9JJC9 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Herpud2Q9JJC9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Herpud2Q9JJC9 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Herpud2Q9JJC9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Herpud2Q9JJC9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Herpud2Q9JJC9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Herpud2Q9JJC9 Mir3960-201ENSMUST00000198213 73 ntBASIC23.75■■□□□ 1.39
Herpud2Q9JJC9 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Herpud2Q9JJC9 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Herpud2Q9JJC9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Herpud2Q9JJC9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
Herpud2Q9JJC9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Herpud2Q9JJC9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Herpud2Q9JJC9 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.74■■□□□ 1.39
Herpud2Q9JJC9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Herpud2Q9JJC9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Herpud2Q9JJC9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Herpud2Q9JJC9 Cap2-205ENSMUST00000225824 1634 ntBASIC23.73■■□□□ 1.39
Herpud2Q9JJC9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Herpud2Q9JJC9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Herpud2Q9JJC9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.72■■□□□ 1.39
Herpud2Q9JJC9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Herpud2Q9JJC9 Scarna2-201ENSMUST00000157560 414 ntBASIC23.71■■□□□ 1.39
Herpud2Q9JJC9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Herpud2Q9JJC9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Herpud2Q9JJC9 Gm11687-201ENSMUST00000118911 886 ntBASIC23.69■■□□□ 1.38
Herpud2Q9JJC9 Gm9806-201ENSMUST00000051080 552 ntBASIC23.69■■□□□ 1.38
Herpud2Q9JJC9 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC23.68■■□□□ 1.38
Herpud2Q9JJC9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Herpud2Q9JJC9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.68■■□□□ 1.38
Herpud2Q9JJC9 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.67■■□□□ 1.38
Herpud2Q9JJC9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.67■■□□□ 1.38
Herpud2Q9JJC9 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC23.67■■□□□ 1.38
Herpud2Q9JJC9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Herpud2Q9JJC9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.66■■□□□ 1.38
Herpud2Q9JJC9 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Herpud2Q9JJC9 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.66■■□□□ 1.38
Herpud2Q9JJC9 Gm45364-201ENSMUST00000210883 159 ntBASIC23.65■■□□□ 1.38
Herpud2Q9JJC9 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Herpud2Q9JJC9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Herpud2Q9JJC9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Herpud2Q9JJC9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.64■■□□□ 1.37
Herpud2Q9JJC9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Herpud2Q9JJC9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Herpud2Q9JJC9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Herpud2Q9JJC9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.63■■□□□ 1.37
Herpud2Q9JJC9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Herpud2Q9JJC9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC23.63■■□□□ 1.37
Herpud2Q9JJC9 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Herpud2Q9JJC9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Herpud2Q9JJC9 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Herpud2Q9JJC9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.61■■□□□ 1.37
Herpud2Q9JJC9 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Herpud2Q9JJC9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
Herpud2Q9JJC9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
Herpud2Q9JJC9 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Herpud2Q9JJC9 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Herpud2Q9JJC9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
Herpud2Q9JJC9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
Herpud2Q9JJC9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Herpud2Q9JJC9 Gm16437-201ENSMUST00000025669 507 ntBASIC23.59■■□□□ 1.37
Herpud2Q9JJC9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Herpud2Q9JJC9 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.59■■□□□ 1.37
Herpud2Q9JJC9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Herpud2Q9JJC9 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Herpud2Q9JJC9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Herpud2Q9JJC9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Herpud2Q9JJC9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Herpud2Q9JJC9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
Herpud2Q9JJC9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
Herpud2Q9JJC9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Herpud2Q9JJC9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Herpud2Q9JJC9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms