Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rtp4Q9ER80 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rtp4Q9ER80 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rtp4Q9ER80 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Rtp4Q9ER80 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.05■■□□□ 1.12
Rtp4Q9ER80 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.05■■□□□ 1.12
Rtp4Q9ER80 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22.05■■□□□ 1.12
Rtp4Q9ER80 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Rtp4Q9ER80 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rtp4Q9ER80 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Rtp4Q9ER80 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rtp4Q9ER80 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Rtp4Q9ER80 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rtp4Q9ER80 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rtp4Q9ER80 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rtp4Q9ER80 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.01■■□□□ 1.11
Rtp4Q9ER80 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22■■□□□ 1.11
Rtp4Q9ER80 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22■■□□□ 1.11
Rtp4Q9ER80 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22■■□□□ 1.11
Rtp4Q9ER80 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Rtp4Q9ER80 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.99■■□□□ 1.11
Rtp4Q9ER80 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Rtp4Q9ER80 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.99■■□□□ 1.11
Rtp4Q9ER80 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rtp4Q9ER80 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Rtp4Q9ER80 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Rtp4Q9ER80 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.97■■□□□ 1.11
Rtp4Q9ER80 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rtp4Q9ER80 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Rtp4Q9ER80 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rtp4Q9ER80 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.97■■□□□ 1.11
Rtp4Q9ER80 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Rtp4Q9ER80 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.96■■□□□ 1.11
Rtp4Q9ER80 Gm11599-201ENSMUST00000118720 878 ntBASIC21.96■■□□□ 1.11
Rtp4Q9ER80 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Rtp4Q9ER80 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Rtp4Q9ER80 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rtp4Q9ER80 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Rtp4Q9ER80 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rtp4Q9ER80 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Rtp4Q9ER80 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Rtp4Q9ER80 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rtp4Q9ER80 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.94■■□□□ 1.1
Rtp4Q9ER80 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.94■■□□□ 1.1
Rtp4Q9ER80 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Rtp4Q9ER80 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rtp4Q9ER80 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rtp4Q9ER80 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.93■■□□□ 1.1
Rtp4Q9ER80 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rtp4Q9ER80 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rtp4Q9ER80 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Rtp4Q9ER80 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rtp4Q9ER80 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Rtp4Q9ER80 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.91■■□□□ 1.1
Rtp4Q9ER80 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Rtp4Q9ER80 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rtp4Q9ER80 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rtp4Q9ER80 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rtp4Q9ER80 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.9■■□□□ 1.1
Rtp4Q9ER80 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Rtp4Q9ER80 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.89■■□□□ 1.1
Rtp4Q9ER80 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Rtp4Q9ER80 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.88■■□□□ 1.09
Rtp4Q9ER80 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Rtp4Q9ER80 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rtp4Q9ER80 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rtp4Q9ER80 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rtp4Q9ER80 Gm30023-201ENSMUST00000197970 889 ntBASIC21.87■■□□□ 1.09
Rtp4Q9ER80 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
Rtp4Q9ER80 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Rtp4Q9ER80 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rtp4Q9ER80 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Rtp4Q9ER80 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rtp4Q9ER80 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.84■■□□□ 1.09
Rtp4Q9ER80 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rtp4Q9ER80 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Rtp4Q9ER80 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Rtp4Q9ER80 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Rtp4Q9ER80 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Rtp4Q9ER80 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rtp4Q9ER80 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.81■■□□□ 1.08
Rtp4Q9ER80 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rtp4Q9ER80 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rtp4Q9ER80 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.79■■□□□ 1.08
Rtp4Q9ER80 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rtp4Q9ER80 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rtp4Q9ER80 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rtp4Q9ER80 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Rtp4Q9ER80 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.78■■□□□ 1.08
Rtp4Q9ER80 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rtp4Q9ER80 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rtp4Q9ER80 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rtp4Q9ER80 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rtp4Q9ER80 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rtp4Q9ER80 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rtp4Q9ER80 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.75■■□□□ 1.07
Rtp4Q9ER80 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rtp4Q9ER80 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rtp4Q9ER80 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Rtp4Q9ER80 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms