Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Ssmem1Q9D9Y8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Ssmem1Q9D9Y8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.41■□□□□ 0.86
Ssmem1Q9D9Y8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.4■□□□□ 0.86
Ssmem1Q9D9Y8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.4■□□□□ 0.86
Ssmem1Q9D9Y8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ssmem1Q9D9Y8 Gm11599-201ENSMUST00000118720 878 ntBASIC20.39■□□□□ 0.85
Ssmem1Q9D9Y8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.39■□□□□ 0.85
Ssmem1Q9D9Y8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.39■□□□□ 0.85
Ssmem1Q9D9Y8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ssmem1Q9D9Y8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ssmem1Q9D9Y8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ssmem1Q9D9Y8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
Ssmem1Q9D9Y8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.38■□□□□ 0.85
Ssmem1Q9D9Y8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ssmem1Q9D9Y8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ssmem1Q9D9Y8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ssmem1Q9D9Y8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ssmem1Q9D9Y8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ssmem1Q9D9Y8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ssmem1Q9D9Y8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Ssmem1Q9D9Y8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Ssmem1Q9D9Y8 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.34■□□□□ 0.85
Ssmem1Q9D9Y8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ssmem1Q9D9Y8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ssmem1Q9D9Y8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ssmem1Q9D9Y8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ssmem1Q9D9Y8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ssmem1Q9D9Y8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Ssmem1Q9D9Y8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ssmem1Q9D9Y8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ssmem1Q9D9Y8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ssmem1Q9D9Y8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ssmem1Q9D9Y8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.3■□□□□ 0.84
Ssmem1Q9D9Y8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ssmem1Q9D9Y8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ssmem1Q9D9Y8 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.29■□□□□ 0.84
Ssmem1Q9D9Y8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.29■□□□□ 0.84
Ssmem1Q9D9Y8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ssmem1Q9D9Y8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ssmem1Q9D9Y8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ssmem1Q9D9Y8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ssmem1Q9D9Y8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ssmem1Q9D9Y8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ssmem1Q9D9Y8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.25■□□□□ 0.83
Ssmem1Q9D9Y8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ssmem1Q9D9Y8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ssmem1Q9D9Y8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ssmem1Q9D9Y8 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ssmem1Q9D9Y8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.23■□□□□ 0.83
Ssmem1Q9D9Y8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Ssmem1Q9D9Y8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ssmem1Q9D9Y8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ssmem1Q9D9Y8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ssmem1Q9D9Y8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ssmem1Q9D9Y8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ssmem1Q9D9Y8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Ssmem1Q9D9Y8 Gm37136-201ENSMUST00000194368 194 ntBASIC20.19■□□□□ 0.82
Ssmem1Q9D9Y8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.19■□□□□ 0.82
Ssmem1Q9D9Y8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ssmem1Q9D9Y8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Ssmem1Q9D9Y8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ssmem1Q9D9Y8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ssmem1Q9D9Y8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ssmem1Q9D9Y8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Ssmem1Q9D9Y8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.17■□□□□ 0.82
Ssmem1Q9D9Y8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ssmem1Q9D9Y8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ssmem1Q9D9Y8 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ssmem1Q9D9Y8 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ssmem1Q9D9Y8 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.15■□□□□ 0.82
Ssmem1Q9D9Y8 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.15■□□□□ 0.82
Ssmem1Q9D9Y8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ssmem1Q9D9Y8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ssmem1Q9D9Y8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ssmem1Q9D9Y8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ssmem1Q9D9Y8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ssmem1Q9D9Y8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ssmem1Q9D9Y8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ssmem1Q9D9Y8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ssmem1Q9D9Y8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ssmem1Q9D9Y8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ssmem1Q9D9Y8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.12■□□□□ 0.81
Ssmem1Q9D9Y8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ssmem1Q9D9Y8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.11■□□□□ 0.81
Ssmem1Q9D9Y8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ssmem1Q9D9Y8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ssmem1Q9D9Y8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ssmem1Q9D9Y8 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ssmem1Q9D9Y8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ssmem1Q9D9Y8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ssmem1Q9D9Y8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.09■□□□□ 0.81
Ssmem1Q9D9Y8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ssmem1Q9D9Y8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Ssmem1Q9D9Y8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.08■□□□□ 0.81
Ssmem1Q9D9Y8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Ssmem1Q9D9Y8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ssmem1Q9D9Y8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.07■□□□□ 0.8
Ssmem1Q9D9Y8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.07■□□□□ 0.8
Ssmem1Q9D9Y8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms