Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Upk3bl1Q9D701 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Upk3bl1Q9D701 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Upk3bl1Q9D701 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Upk3bl1Q9D701 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Upk3bl1Q9D701 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Upk3bl1Q9D701 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Upk3bl1Q9D701 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Upk3bl1Q9D701 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Upk3bl1Q9D701 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Upk3bl1Q9D701 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Upk3bl1Q9D701 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Upk3bl1Q9D701 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Upk3bl1Q9D701 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Upk3bl1Q9D701 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Upk3bl1Q9D701 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Upk3bl1Q9D701 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Upk3bl1Q9D701 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Upk3bl1Q9D701 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Upk3bl1Q9D701 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.33■■□□□ 1
Upk3bl1Q9D701 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.33■■□□□ 1
Upk3bl1Q9D701 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Upk3bl1Q9D701 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Upk3bl1Q9D701 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Upk3bl1Q9D701 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.32■■□□□ 1
Upk3bl1Q9D701 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Upk3bl1Q9D701 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Upk3bl1Q9D701 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.31■■□□□ 1
Upk3bl1Q9D701 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.31■■□□□ 1
Upk3bl1Q9D701 Peli2-204ENSMUST00000226513 1320 ntBASIC21.31■■□□□ 1
Upk3bl1Q9D701 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Upk3bl1Q9D701 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.31■■□□□ 1
Upk3bl1Q9D701 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.31■■□□□ 1
Upk3bl1Q9D701 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Upk3bl1Q9D701 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Upk3bl1Q9D701 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Upk3bl1Q9D701 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Upk3bl1Q9D701 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Upk3bl1Q9D701 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Upk3bl1Q9D701 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Upk3bl1Q9D701 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Upk3bl1Q9D701 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Upk3bl1Q9D701 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Upk3bl1Q9D701 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
Upk3bl1Q9D701 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.27■■□□□ 1
Upk3bl1Q9D701 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Upk3bl1Q9D701 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.27■■□□□ 1
Upk3bl1Q9D701 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Upk3bl1Q9D701 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
Upk3bl1Q9D701 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Upk3bl1Q9D701 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Upk3bl1Q9D701 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.25■□□□□ 0.99
Upk3bl1Q9D701 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Upk3bl1Q9D701 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.24■□□□□ 0.99
Upk3bl1Q9D701 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.24■□□□□ 0.99
Upk3bl1Q9D701 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Upk3bl1Q9D701 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Upk3bl1Q9D701 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Upk3bl1Q9D701 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Upk3bl1Q9D701 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Upk3bl1Q9D701 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.23■□□□□ 0.99
Upk3bl1Q9D701 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Upk3bl1Q9D701 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Upk3bl1Q9D701 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
Upk3bl1Q9D701 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Upk3bl1Q9D701 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Upk3bl1Q9D701 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Upk3bl1Q9D701 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Upk3bl1Q9D701 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Upk3bl1Q9D701 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Upk3bl1Q9D701 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Upk3bl1Q9D701 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Upk3bl1Q9D701 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Upk3bl1Q9D701 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Upk3bl1Q9D701 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Upk3bl1Q9D701 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Upk3bl1Q9D701 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Upk3bl1Q9D701 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Upk3bl1Q9D701 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Upk3bl1Q9D701 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.21■□□□□ 0.99
Upk3bl1Q9D701 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Upk3bl1Q9D701 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Upk3bl1Q9D701 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Upk3bl1Q9D701 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Upk3bl1Q9D701 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Upk3bl1Q9D701 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Upk3bl1Q9D701 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Upk3bl1Q9D701 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Upk3bl1Q9D701 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Upk3bl1Q9D701 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Upk3bl1Q9D701 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Upk3bl1Q9D701 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.18■□□□□ 0.98
Upk3bl1Q9D701 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Upk3bl1Q9D701 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Upk3bl1Q9D701 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Upk3bl1Q9D701 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Upk3bl1Q9D701 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Upk3bl1Q9D701 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
Upk3bl1Q9D701 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Upk3bl1Q9D701 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms