Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.99■■□□□ 1.11
Rita1Q9D1H0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rita1Q9D1H0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.98■■□□□ 1.11
Rita1Q9D1H0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
Rita1Q9D1H0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Rita1Q9D1H0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rita1Q9D1H0 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.94■■□□□ 1.1
Rita1Q9D1H0 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rita1Q9D1H0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rita1Q9D1H0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Rita1Q9D1H0 Gm11599-201ENSMUST00000118720 878 ntBASIC21.93■■□□□ 1.1
Rita1Q9D1H0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.93■■□□□ 1.1
Rita1Q9D1H0 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rita1Q9D1H0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Rita1Q9D1H0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Rita1Q9D1H0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rita1Q9D1H0 Particl-201ENSMUST00000205370 1560 ntBASIC21.91■■□□□ 1.1
Rita1Q9D1H0 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rita1Q9D1H0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rita1Q9D1H0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rita1Q9D1H0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Rita1Q9D1H0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Rita1Q9D1H0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Rita1Q9D1H0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Rita1Q9D1H0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.88■■□□□ 1.09
Rita1Q9D1H0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Rita1Q9D1H0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.88■■□□□ 1.09
Rita1Q9D1H0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rita1Q9D1H0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rita1Q9D1H0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.87■■□□□ 1.09
Rita1Q9D1H0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rita1Q9D1H0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Rita1Q9D1H0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rita1Q9D1H0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rita1Q9D1H0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rita1Q9D1H0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Rita1Q9D1H0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.84■■□□□ 1.09
Rita1Q9D1H0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rita1Q9D1H0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rita1Q9D1H0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Rita1Q9D1H0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rita1Q9D1H0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rita1Q9D1H0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Rita1Q9D1H0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Rita1Q9D1H0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rita1Q9D1H0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rita1Q9D1H0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rita1Q9D1H0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rita1Q9D1H0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rita1Q9D1H0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.8■■□□□ 1.08
Rita1Q9D1H0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rita1Q9D1H0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.79■■□□□ 1.08
Rita1Q9D1H0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Rita1Q9D1H0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Rita1Q9D1H0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Rita1Q9D1H0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rita1Q9D1H0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rita1Q9D1H0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rita1Q9D1H0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rita1Q9D1H0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Rita1Q9D1H0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rita1Q9D1H0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rita1Q9D1H0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rita1Q9D1H0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rita1Q9D1H0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.74■■□□□ 1.07
Rita1Q9D1H0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.73■■□□□ 1.07
Rita1Q9D1H0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rita1Q9D1H0 Gm37136-201ENSMUST00000194368 194 ntBASIC21.73■■□□□ 1.07
Rita1Q9D1H0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rita1Q9D1H0 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Rita1Q9D1H0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Rita1Q9D1H0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rita1Q9D1H0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rita1Q9D1H0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rita1Q9D1H0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Rita1Q9D1H0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.7■■□□□ 1.06
Rita1Q9D1H0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rita1Q9D1H0 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.7■■□□□ 1.06
Rita1Q9D1H0 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.7■■□□□ 1.06
Rita1Q9D1H0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rita1Q9D1H0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rita1Q9D1H0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rita1Q9D1H0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rita1Q9D1H0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rita1Q9D1H0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rita1Q9D1H0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rita1Q9D1H0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rita1Q9D1H0 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rita1Q9D1H0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rita1Q9D1H0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Rita1Q9D1H0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rita1Q9D1H0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rita1Q9D1H0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rita1Q9D1H0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rita1Q9D1H0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.64■■□□□ 1.05
Rita1Q9D1H0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.64■■□□□ 1.05
Rita1Q9D1H0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.64■■□□□ 1.05
Rita1Q9D1H0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.64■■□□□ 1.05
Rita1Q9D1H0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rita1Q9D1H0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms