Protein–RNA interactions for Protein: Q9CQE0

Rnf138, E3 ubiquitin-protein ligase RNF138, mousemouse

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138Q9CQE0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rnf138Q9CQE0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rnf138Q9CQE0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Rnf138Q9CQE0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rnf138Q9CQE0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rnf138Q9CQE0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Rnf138Q9CQE0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rnf138Q9CQE0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rnf138Q9CQE0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.57■■□□□ 1.2
Rnf138Q9CQE0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.57■■□□□ 1.2
Rnf138Q9CQE0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Rnf138Q9CQE0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rnf138Q9CQE0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rnf138Q9CQE0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rnf138Q9CQE0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Rnf138Q9CQE0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rnf138Q9CQE0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rnf138Q9CQE0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Rnf138Q9CQE0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rnf138Q9CQE0 Gm37136-201ENSMUST00000194368 194 ntBASIC22.51■■□□□ 1.19
Rnf138Q9CQE0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.48■■□□□ 1.19
Rnf138Q9CQE0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.48■■□□□ 1.19
Rnf138Q9CQE0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.47■■□□□ 1.19
Rnf138Q9CQE0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.47■■□□□ 1.19
Rnf138Q9CQE0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Rnf138Q9CQE0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rnf138Q9CQE0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Rnf138Q9CQE0 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Rnf138Q9CQE0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Rnf138Q9CQE0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rnf138Q9CQE0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.45■■□□□ 1.18
Rnf138Q9CQE0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Rnf138Q9CQE0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rnf138Q9CQE0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Rnf138Q9CQE0 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Rnf138Q9CQE0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.42■■□□□ 1.18
Rnf138Q9CQE0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rnf138Q9CQE0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Rnf138Q9CQE0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Rnf138Q9CQE0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rnf138Q9CQE0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Rnf138Q9CQE0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.4■■□□□ 1.18
Rnf138Q9CQE0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Rnf138Q9CQE0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.39■■□□□ 1.17
Rnf138Q9CQE0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.39■■□□□ 1.17
Rnf138Q9CQE0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rnf138Q9CQE0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Rnf138Q9CQE0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Rnf138Q9CQE0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Rnf138Q9CQE0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.37■■□□□ 1.17
Rnf138Q9CQE0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rnf138Q9CQE0 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.36■■□□□ 1.17
Rnf138Q9CQE0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rnf138Q9CQE0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rnf138Q9CQE0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rnf138Q9CQE0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
Rnf138Q9CQE0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rnf138Q9CQE0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rnf138Q9CQE0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Rnf138Q9CQE0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rnf138Q9CQE0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rnf138Q9CQE0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.33■■□□□ 1.17
Rnf138Q9CQE0 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.33■■□□□ 1.17
Rnf138Q9CQE0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Rnf138Q9CQE0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Rnf138Q9CQE0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rnf138Q9CQE0 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.3■■□□□ 1.16
Rnf138Q9CQE0 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.3■■□□□ 1.16
Rnf138Q9CQE0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Rnf138Q9CQE0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.29■■□□□ 1.16
Rnf138Q9CQE0 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rnf138Q9CQE0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Rnf138Q9CQE0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf138Q9CQE0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Rnf138Q9CQE0 Gm11175-201ENSMUST00000116172 543 ntBASIC22.27■■□□□ 1.16
Rnf138Q9CQE0 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.27■■□□□ 1.16
Rnf138Q9CQE0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Rnf138Q9CQE0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.26■■□□□ 1.15
Rnf138Q9CQE0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.26■■□□□ 1.15
Rnf138Q9CQE0 Gm6311-201ENSMUST00000073790 878 ntBASIC22.26■■□□□ 1.15
Rnf138Q9CQE0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rnf138Q9CQE0 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.25■■□□□ 1.15
Rnf138Q9CQE0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.25■■□□□ 1.15
Rnf138Q9CQE0 Gm4799-201ENSMUST00000095396 657 ntBASIC22.25■■□□□ 1.15
Rnf138Q9CQE0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.24■■□□□ 1.15
Rnf138Q9CQE0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rnf138Q9CQE0 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rnf138Q9CQE0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rnf138Q9CQE0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.23■■□□□ 1.15
Rnf138Q9CQE0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rnf138Q9CQE0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.22■■□□□ 1.15
Rnf138Q9CQE0 Mir3960-201ENSMUST00000198213 73 ntBASIC22.22■■□□□ 1.15
Rnf138Q9CQE0 Gm45364-201ENSMUST00000210883 159 ntBASIC22.22■■□□□ 1.15
Rnf138Q9CQE0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Rnf138Q9CQE0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.22■■□□□ 1.15
Rnf138Q9CQE0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rnf138Q9CQE0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.21■■□□□ 1.15
Rnf138Q9CQE0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Rnf138Q9CQE0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Rnf138Q9CQE0 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 113.5 ms